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    v0.1 cell line networks
    v0.2 aggregate tissue networks
    v0.3 TF enrichement tool
    v0.4 single-sample tissue networks
    v0.5 CLUEreg tool
    v0.6 colon cancer networks
    v0.7 drug networks
    v0.7.1 API v1
    v0.8 liver, cervix, and breast cancer networks
    v0.9 miRNA tissue networks
    v0.9.1 bootstrap 5
    v1.0 glioblastoma networks
    v1.0.1 drug combinations
    v1.1 Cell line networks
    v1.2 User upload network
    v1.2.1 Gene targeting table
    v1.2.2 DRAGON miRNA network
    v1.3 Network comparison
    v1.3.1 Guided tours
    v1.4.0 CCLE multi-omic map
    v1.5.0 EGRET networks

    PCPG cancer networks

    Data sets 1 Networks Aggregate 1

    Hover over the bar plot to get the GO term. Differentially targeted genes and TFs were computed by comparing a cancer network to all other cancers.

    Tool description

    PANDA reconstructs a gene regulatory network using TF PPI, TF DNA binding motif, and gene expression samples. You can check the phenotypic information for the clinical variables of the samples that were used to reconstruct the network.

    Publication
    Please check the reference at the following link.
    # Tissue Tool netZoo release Network
    PPI
    Motif Expression TFs Genes Data Samples Precision
    Reference
    1 Pheochromocytoma and Paraganglioma PANDA netZooR 0.9
    AdjCodeVis
    644 29375 TCGA 178 D

    Variable description

    This is a description of the primary clinical variables of the gene expression samples that were used to generate the gene regulatory network.

    Sample
    Gender Race Stage
    Vital status Age
    Days to last follow up Tumor ID
    TCGA-RW-A688-01A FEMALE WHITE - Alive 69 37 PCPG
    TCGA-QR-A6GR-01A FEMALE WHITE - Alive 30 703 PCPG
    TCGA-S7-A7WQ-01A MALE WHITE - Alive 19 346 PCPG
    TCGA-P8-A6RX-01A MALE WHITE - Alive 65 29 PCPG
    TCGA-SR-A6MP-01A FEMALE WHITE - Alive 30 1558 PCPG
    TCGA-QR-A70Q-01A MALE WHITE - Alive 33 140 PCPG
    TCGA-S7-A7WW-01A MALE WHITE - Alive 34 324 PCPG
    TCGA-SR-A6MV-01A FEMALE WHITE - Alive 35 3269 PCPG
    TCGA-QT-A5XK-01A FEMALE BLACK OR AFRICAN AMERICAN - Alive 56 211 PCPG
    TCGA-WB-A80L-01A FEMALE WHITE - Alive 30 678 PCPG
    TCGA-WB-A81Q-01A MALE WHITE - Dead 44 [Not Available] PCPG
    TCGA-QR-A703-01A MALE WHITE - Alive 23 1167 PCPG
    TCGA-RW-A684-01A FEMALE WHITE - Alive 64 32 PCPG
    TCGA-SR-A6N0-01A FEMALE WHITE - Alive 45 1106 PCPG
    TCGA-WB-A81T-01A MALE WHITE - Alive 45 288 PCPG
    TCGA-QT-A5XL-01A MALE WHITE - Alive 27 55 PCPG
    TCGA-SR-A6MX-01A MALE WHITE - Dead 55 [Not Available] PCPG
    TCGA-QR-A70M-01A MALE WHITE - Alive 38 1034 PCPG
    TCGA-QT-A5XP-01A FEMALE BLACK OR AFRICAN AMERICAN - Alive 57 134 PCPG
    TCGA-SR-A6MQ-01A FEMALE ASIAN - Alive 61 1656 PCPG
    TCGA-RW-A680-01A FEMALE WHITE - Alive 57 1013 PCPG
    TCGA-QR-A7IP-01A MALE WHITE - Alive 30 546 PCPG
    TCGA-QR-A70I-01A MALE BLACK OR AFRICAN AMERICAN - Alive 24 910 PCPG
    TCGA-WB-A80M-01A MALE WHITE - Alive 63 136 PCPG
    TCGA-QR-A70W-01A MALE WHITE - Alive 40 1271 PCPG
    TCGA-QR-A70H-01A MALE WHITE - Alive 36 816 PCPG
    TCGA-RT-A6Y9-01A FEMALE WHITE - Alive 50 2957 PCPG
    TCGA-QR-A6GX-01A FEMALE BLACK OR AFRICAN AMERICAN - Alive 28 579 PCPG
    TCGA-RW-A68C-01A MALE WHITE - Alive 43 191 PCPG
    TCGA-QR-A70T-01A FEMALE BLACK OR AFRICAN AMERICAN - Alive 40 267 PCPG
    TCGA-P8-A5KC-01A MALE WHITE - Alive 48 883 PCPG
    TCGA-QR-A702-01A FEMALE WHITE - Alive 75 39 PCPG
    TCGA-RW-A7CZ-01A FEMALE WHITE - Alive 72 134 PCPG
    TCGA-SQ-A6I6-01A MALE WHITE - Alive 39 3 PCPG
    TCGA-WB-A820-01A MALE WHITE - Dead 40 [Not Available] PCPG
    TCGA-TT-A6YO-01A FEMALE BLACK OR AFRICAN AMERICAN - Alive 64 317 PCPG
    TCGA-WB-A80Y-01A FEMALE WHITE - Dead 59 [Not Available] PCPG
    TCGA-WB-A81J-01A MALE WHITE - Alive 40 57 PCPG
    TCGA-PR-A5PG-01A FEMALE WHITE - Alive 42 1094 PCPG
    TCGA-QR-A70A-01A FEMALE WHITE - Alive 54 2119 PCPG
    TCGA-WB-A81G-01A MALE WHITE - Alive 25 737 PCPG
    TCGA-QR-A6H0-01A MALE WHITE - Alive 53 280 PCPG
    TCGA-QR-A6GS-01A FEMALE WHITE - Alive 51 38 PCPG
    TCGA-SQ-A6I4-01A MALE WHITE - Alive 53 43 PCPG
    TCGA-QR-A707-01A FEMALE WHITE - Alive 43 398 PCPG
    TCGA-QR-A6GT-01A FEMALE WHITE - Alive 63 4185 PCPG
    TCGA-WB-A80O-01A FEMALE WHITE - Alive 83 128 PCPG
    TCGA-QR-A70K-01A MALE WHITE - Alive 61 274 PCPG
    TCGA-S7-A7WU-01A FEMALE WHITE - Alive 63 601 PCPG
    TCGA-WB-A81P-01A FEMALE WHITE - Alive 73 395 PCPG
    TCGA-QR-A70R-01A MALE WHITE - Alive 43 432 PCPG
    TCGA-WB-A81I-01A MALE WHITE - Alive 64 34 PCPG
    TCGA-QR-A6GU-01A MALE WHITE - Alive 31 1791 PCPG
    TCGA-QR-A70O-01A FEMALE WHITE - Alive 35 111 PCPG
    TCGA-W2-A7HD-01A FEMALE WHITE - Alive 76 218 PCPG
    TCGA-WB-A81N-01A FEMALE WHITE - Alive 28 1406 PCPG
    TCGA-QR-A6H4-01A FEMALE WHITE - Alive 56 2661 PCPG
    TCGA-QR-A705-01A FEMALE WHITE - Alive 63 317 PCPG
    TCGA-RW-A8AZ-01A MALE WHITE - Dead 66 [Not Available] PCPG
    TCGA-QR-A70P-01A FEMALE WHITE - Dead 45 [Not Available] PCPG
    TCGA-S7-A7WX-01A MALE WHITE - Alive 52 358 PCPG
    TCGA-QR-A708-01A FEMALE WHITE - Alive 44 35 PCPG
    TCGA-QR-A6H3-01A MALE WHITE - Alive 41 434 PCPG
    TCGA-SA-A6C2-01A FEMALE BLACK OR AFRICAN AMERICAN - Alive 46 296 PCPG
    TCGA-QR-A70J-01A FEMALE WHITE - Alive 42 399 PCPG
    TCGA-S7-A7WM-01A MALE WHITE - Alive 76 730 PCPG
    TCGA-SR-A6MY-01A FEMALE WHITE - Alive 54 456 PCPG
    TCGA-RW-A68A-01A FEMALE WHITE - Alive 19 397 PCPG
    TCGA-W2-A7HH-01A FEMALE WHITE - Alive 69 188 PCPG
    TCGA-WB-A81E-01A FEMALE WHITE - Alive 47 1131 PCPG
    TCGA-W2-A7H7-01A MALE WHITE - Alive 59 109 PCPG
    TCGA-QT-A7U0-01A MALE WHITE - Alive 56 29 PCPG
    TCGA-RW-A689-01A MALE WHITE - Alive 58 356 PCPG
    TCGA-WB-A80P-01A MALE WHITE - Alive 20 9219 PCPG
    TCGA-RW-A67V-01A FEMALE WHITE - Alive 44 2643 PCPG
    TCGA-S7-A7WL-01A MALE WHITE - Alive 59 611 PCPG
    TCGA-W2-A7HF-01A FEMALE BLACK OR AFRICAN AMERICAN - Alive 28 137 PCPG
    TCGA-WB-A819-01A MALE WHITE - Alive 36 234 PCPG
    TCGA-SP-A6QD-01A MALE [Not Evaluated] - Alive 26 3087 PCPG
    TCGA-WB-A80V-01A FEMALE WHITE - Alive 63 215 PCPG
    TCGA-WB-A81W-01A MALE WHITE - Alive 41 1719 PCPG
    TCGA-S7-A7WN-01A MALE WHITE - Alive 40 800 PCPG
    TCGA-RW-A686-01A MALE WHITE - Alive 62 405 PCPG
    TCGA-TT-A6YK-01A MALE WHITE - Alive 61 765 PCPG
    TCGA-P8-A5KD-01A FEMALE WHITE - Alive 35 69 PCPG
    TCGA-QR-A6GW-01A FEMALE WHITE - Alive 53 491 PCPG
    TCGA-QR-A70N-01A MALE BLACK OR AFRICAN AMERICAN - Alive 32 43 PCPG
    TCGA-SR-A6MR-01A MALE WHITE - Alive 41 2020 PCPG
    TCGA-RW-A68G-01A MALE WHITE - Alive 49 21 PCPG
    TCGA-WB-A80K-01A MALE WHITE - Alive 49 840 PCPG
    TCGA-RW-A68F-01A FEMALE WHITE - Alive 51 457 PCPG
    TCGA-RW-A67W-01A FEMALE WHITE - Alive 46 604 PCPG
    TCGA-RW-A68B-01A MALE [Not Evaluated] - Alive 31 242 PCPG
    TCGA-QR-A6H1-01A MALE WHITE - Alive 55 431 PCPG
    TCGA-SR-A6MS-01A FEMALE WHITE - Alive 35 2222 PCPG
    TCGA-TT-A6YP-01A FEMALE WHITE - Alive 19 770 PCPG
    TCGA-RW-A7D0-01A FEMALE WHITE - Alive 47 54 PCPG
    TCGA-S7-A7X0-01A FEMALE WHITE - Alive 75 185 PCPG
    TCGA-RW-A67X-01A MALE WHITE - Alive 47 89 PCPG
    TCGA-TT-A6YJ-01A FEMALE [Unknown] - Alive 45 132 PCPG
    TCGA-P8-A6RY-01A MALE WHITE - Alive 55 179 PCPG
    TCGA-QR-A6ZZ-01A FEMALE WHITE - Alive 30 48 PCPG
    TCGA-RW-A68D-01A FEMALE ASIAN - Alive 31 2214 PCPG
    TCGA-QR-A6GO-01A MALE WHITE - Alive 43 1065 PCPG
    TCGA-RX-A8JQ-01A MALE WHITE - Alive 44 18 PCPG
    TCGA-WB-A822-01A MALE WHITE - Alive 23 2822 PCPG
    TCGA-W2-A7H5-01B FEMALE WHITE - Alive 25 307 PCPG
    TCGA-S7-A7WV-01A FEMALE WHITE - Alive 35 527 PCPG
    TCGA-SR-A6MT-01A FEMALE WHITE - Alive 57 3247 PCPG
    TCGA-QT-A5XJ-01A FEMALE BLACK OR AFRICAN AMERICAN - Alive 42 773 PCPG
    TCGA-W2-A7UY-01A FEMALE WHITE - Alive 44 24 PCPG
    TCGA-SP-A6QH-01A FEMALE ASIAN - Alive 35 1857 PCPG
    TCGA-S7-A7WT-01A MALE WHITE - Alive 74 912 PCPG
    TCGA-WB-A81R-01A FEMALE WHITE - Alive 55 49 PCPG
    TCGA-QR-A7IN-01A FEMALE BLACK OR AFRICAN AMERICAN - Alive 52 377 PCPG
    TCGA-QT-A5XN-01A FEMALE BLACK OR AFRICAN AMERICAN - Alive 51 766 PCPG
    TCGA-WB-A81A-01A FEMALE WHITE - Alive 65 371 PCPG
    TCGA-WB-A816-01A FEMALE WHITE - Alive 42 531 PCPG
    TCGA-QR-A6H5-01A FEMALE BLACK OR AFRICAN AMERICAN - Alive 30 959 PCPG
    TCGA-QR-A70G-01B MALE BLACK OR AFRICAN AMERICAN - Alive 54 71 PCPG
    TCGA-P7-A5NY-01A FEMALE WHITE - Alive 21 195 PCPG
    TCGA-SP-A6QF-01A MALE ASIAN - Alive 48 2149 PCPG
    TCGA-SP-A6QJ-01A FEMALE WHITE - Alive 64 274 PCPG
    TCGA-RT-A6YA-01A FEMALE WHITE - Alive 71 1249 PCPG
    TCGA-WB-A815-01A FEMALE WHITE - Alive 68 182 PCPG
    TCGA-SP-A6QC-01A MALE WHITE - Alive 46 3180 PCPG
    TCGA-QR-A6GY-01A FEMALE WHITE - Alive 37 32 PCPG
    TCGA-QT-A69Q-01A MALE WHITE - Alive 40 24 PCPG
    TCGA-WB-A817-01A MALE WHITE - Alive 27 700 PCPG
    TCGA-QR-A70E-01A FEMALE WHITE - Alive 31 192 PCPG
    TCGA-RM-A68W-01A FEMALE WHITE - Alive 41 28 PCPG
    TCGA-QR-A6H6-01A MALE WHITE - Alive 27 474 PCPG
    TCGA-SP-A6QI-01A MALE WHITE - Alive 47 2983 PCPG
    TCGA-W2-A7HB-01A MALE WHITE - Alive 24 224 PCPG
    TCGA-W2-A7HC-01A MALE WHITE - Alive 67 62 PCPG
    TCGA-QR-A70U-01A FEMALE WHITE - Alive 46 1473 PCPG
    TCGA-WB-A81K-01A MALE WHITE - Alive 45 595 PCPG
    TCGA-QR-A700-01A MALE WHITE - Alive 67 978 PCPG
    TCGA-QR-A70X-01A FEMALE BLACK OR AFRICAN AMERICAN - Alive 46 183 PCPG
    TCGA-RT-A6YC-01A MALE WHITE - Alive 31 246 PCPG
    TCGA-S7-A7WP-01A FEMALE WHITE - Alive 25 441 PCPG
    TCGA-SR-A6MU-01A FEMALE WHITE - Alive 49 3362 PCPG
    TCGA-P7-A5NX-01A FEMALE WHITE - Alive 78 82 PCPG
    TCGA-RM-A68T-01A MALE BLACK OR AFRICAN AMERICAN - Alive 46 1178 PCPG
    TCGA-S7-A7X2-01A FEMALE WHITE - Alive 57 371 PCPG
    TCGA-S7-A7X1-01A MALE WHITE - Alive 23 240 PCPG
    TCGA-WB-A81H-01A FEMALE WHITE - Alive 44 1294 PCPG
    TCGA-RW-A67Y-01A FEMALE WHITE - Alive 43 216 PCPG
    TCGA-SR-A6MZ-01A FEMALE WHITE - Alive 46 345 PCPG
    TCGA-WB-A818-01A MALE WHITE - Alive 37 795 PCPG
    TCGA-WB-A814-01A FEMALE BLACK OR AFRICAN AMERICAN - Alive 35 1000 PCPG
    TCGA-W2-A7HA-01B FEMALE AMERICAN INDIAN OR ALASKA NATIVE - Alive 63 36 PCPG
    TCGA-XG-A823-01A FEMALE WHITE - Alive 25 210 PCPG
    TCGA-RW-A685-01A FEMALE WHITE - Alive 70 26 PCPG
    TCGA-W2-A7HE-01A MALE WHITE - Alive 80 195 PCPG
    TCGA-WB-A81M-01A FEMALE WHITE - Alive 42 652 PCPG
    TCGA-WB-A80N-01A MALE WHITE - Alive 54 144 PCPG
    TCGA-QT-A5XM-01A MALE WHITE - Alive 43 22 PCPG
    TCGA-QR-A70C-01A FEMALE BLACK OR AFRICAN AMERICAN - Alive 51 3534 PCPG
    TCGA-QR-A6H2-01A MALE ASIAN - Alive 33 302 PCPG
    TCGA-WB-A81D-01A FEMALE WHITE - Alive 82 24 PCPG
    TCGA-PR-A5PH-01A MALE WHITE - Alive 47 852 PCPG
    TCGA-QT-A5XO-01A FEMALE BLACK OR AFRICAN AMERICAN - Alive 63 70 PCPG
    TCGA-TT-A6YN-01A FEMALE WHITE - Alive 37 242 PCPG
    TCGA-WB-A81V-01A MALE WHITE - Alive 57 2161 PCPG
    TCGA-RW-A681-01A MALE WHITE - Alive 56 724 PCPG
    TCGA-SP-A6QK-01A FEMALE ASIAN - Alive 46 3013 PCPG
    TCGA-QR-A70D-01A FEMALE BLACK OR AFRICAN AMERICAN - Alive 39 7 PCPG
    TCGA-PR-A5PF-01A FEMALE WHITE - Alive 62 240 PCPG
    TCGA-QR-A70V-01A FEMALE [Unknown] - Alive 66 2 PCPG
    TCGA-WB-A81F-01A MALE WHITE - Alive 40 730 PCPG
    TCGA-S7-A7WR-01A FEMALE WHITE - Alive 32 909 PCPG
    TCGA-WB-A821-01A FEMALE WHITE - Alive 73 41 PCPG
    TCGA-WB-A81S-01A FEMALE WHITE - Alive 59 357 PCPG
    TCGA-SP-A6QG-01A FEMALE WHITE - Alive 35 2040 PCPG
    TCGA-S7-A7WO-01A FEMALE WHITE - Alive 76 715 PCPG
    TCGA-WB-A80Q-01A FEMALE WHITE - Alive 64 3444 PCPG
    TCGA-QR-A706-01A FEMALE WHITE - Alive 50 125 PCPG
    Sample Gender Race Stage Status Age Days to follow up Tumor ID
    Contact

    Department of Biostatistics
    Harvard T.H. Chan School of Public Health

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