To get the full list of phenotypic variables, please check the menu below. Please click on the scatter plot to access the network view page.
Tool description
PANDA reconstructs a gene regulatory network using TF PPI, TF DNA binding motif as regulation prior, and gene expression samples. PUMA reconstructs a gene regulatory network with miRNA as regulators using gene expression samples and miRNA predicted targets by miRanda or TargetScan as regulation priors. The Regulator-regulator interaction matrix is set to the identity matrix in the algorithm. LIONESS reconstructs patient-specific PANDA networks for each gene expression sample. BONOBO is a single-sample network inference method, which can be used to estimate patient-specific co-expression matrices. To download sample-specific networks, you can check the phenotypic information and select the networks by clinical variables or download all the samples in a single file.
| # | Tissue | Tool | netZoo release | Network |
PPI |
Regulation prior | Expression |
Regulator |
nReg |
Genes | Samples | Precision |
Reference |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | Artery coronary | PANDA | netZooM 0.1 | Motif | TF | 644 | 30243 | 140 | D | ||||
| 2 | Artery coronary | PANDA-LIONESS | netZooM 0.1 | Motif | TF | 644 | 30243 | 140 | D | ||||
| 3 | Artery coronary | PUMA | netZooM 0.3 | - | miRanda | miRNA | 643 | 16161 | 140 | D | |||
| 4 | Artery coronary | PUMA | netZooM 0.3 | - | TargetScan | miRNA | 643 | 16161 | 140 | D |
Variable description
PANDA-LIONESS networks are single-sample networks generated by first estimating an aggregate PANDA network then deriving patient-specific LIONESS networks. You can either download all the networks to get a matrix of size the number of samples by the number of edges. The number of edges is 644 * 30243 (number of miRNA/TFs * number of genes) (~ 106). Otherwise, you can specify the sample network to download and you will get a miRNA/TF-by-gene matrix named after the GTEx sample reference.
| Sample | Subject | Gender |
Age | DTH-HRDY |
SMAT-SSCR |
SMRIN |
SMTS |
SMUBRID |
Isch. time |
Time point |
Net. |
|---|---|---|---|---|---|---|---|---|---|---|---|
| All | All | - | - | - | - | - | - | - | - | - | Edg47 GB |
| GTEX-1117F-0626-SM-5N9CS | GTEX-1117F | 2 | 60-69 | 4 | 1 | 6.9 | Blood Vessel | 1621 | 1243 | Actual Death | |
| GTEX-1122O-0426-SM-5H12G | GTEX-1122O | 2 | 60-69 | 0 | 0 | 7.7 | Blood Vessel | 1621 | 63 | Actual Death | |
| GTEX-117YX-1726-SM-5GZZS | GTEX-117YX | 1 | 50-59 | 0 | 0 | 7.9 | Blood Vessel | 1621 | 115 | Actual Death | |
| GTEX-11DXX-0826-SM-5GZZP | GTEX-11DXX | 2 | 60-69 | 0 | 0 | 7.3 | Blood Vessel | 1621 | 98 | Actual Death | |
| GTEX-11DXY-1126-SM-5987W | GTEX-11DXY | 1 | 60-69 | 2 | 1 | 6.5 | Blood Vessel | 1621 | 908 | Presumed Death | |
| GTEX-11DXZ-0526-SM-5GU7J | GTEX-11DXZ | 1 | 50-59 | 0 | 1 | 6.4 | Blood Vessel | 1621 | 276 | Actual Death | |
| GTEX-11DYG-0926-SM-5EGGW | GTEX-11DYG | 1 | 60-69 | 2 | 1 | 5.8 | Blood Vessel | 1621 | 853 | Actual Death | |
| GTEX-11EM3-0526-SM-5H12N | GTEX-11EM3 | 2 | 20-29 | 0 | 1 | 7.1 | Blood Vessel | 1621 | 138 | Actual Death | |
| GTEX-11GS4-0626-SM-5A5LC | GTEX-11GS4 | 1 | 60-69 | 2 | 1 | 6 | Blood Vessel | 1621 | 803 | Actual Death | |
| GTEX-11I78-1026-SM-5HL74 | GTEX-11I78 | 2 | 50-59 | 0 | 1 | 6.4 | Blood Vessel | 1621 | 101 | Actual Death | |
| GTEX-11ONC-1126-SM-5GU6G | GTEX-11ONC | 1 | 60-69 | 2 | 1 | 6.1 | Blood Vessel | 1621 | 681 | Actual Death | |
| GTEX-11TT1-1526-SM-5EQKU | GTEX-11TT1 | 1 | 20-29 | 0 | 1 | 8.2 | Blood Vessel | 1621 | 93 | Actual Death | |
| GTEX-11UD2-1126-SM-5EQM6 | GTEX-11UD2 | 1 | 50-59 | 2 | 1 | 7.3 | Blood Vessel | 1621 | 906 | Actual Death | |
| GTEX-11ZTS-1026-SM-5LU8O | GTEX-11ZTS | 2 | 60-69 | 2 | 1 | 6.5 | Blood Vessel | 1621 | 645 | Actual Death | |
| GTEX-11ZTT-0426-SM-5EQLK | GTEX-11ZTT | 2 | 60-69 | 0 | 1 | 8 | Blood Vessel | 1621 | 167 | Actual Death | |
| GTEX-11ZUS-0526-SM-59884 | GTEX-11ZUS | 1 | 30-39 | 1 | 1 | 6.8 | Blood Vessel | 1621 | 1356 | Actual Death | |
| GTEX-12696-0526-SM-5EQ3Z | GTEX-12696 | 1 | 60-69 | 3 | 1 | 6.2 | Blood Vessel | 1621 | 525 | Actual Death | |
| GTEX-12WSC-0926-SM-5EQ63 | GTEX-12WSC | 1 | 50-59 | 2 | 2 | 7.2 | Blood Vessel | 1621 | 845 | Actual Death | |
| GTEX-12WSD-1026-SM-5EQ42 | GTEX-12WSD | 2 | 60-69 | 2 | 1 | 6.7 | Blood Vessel | 1621 | 522 | Actual Death | |
| GTEX-12WSK-0726-SM-5LZUV | GTEX-12WSK | 2 | 40-49 | 0 | 1 | 8.1 | Blood Vessel | 1621 | 155 | Actual Death | |
| GTEX-12WSL-0926-SM-5N9EK | GTEX-12WSL | 1 | 50-59 | 0 | 1 | 7.1 | Blood Vessel | 1621 | 250 | Actual Death | |
| GTEX-12ZZX-0626-SM-5EQ46 | GTEX-12ZZX | 2 | 40-49 | 1 | 1 | 6.2 | Blood Vessel | 1621 | 638 | Actual Death | |
| GTEX-131XF-0526-SM-5HL87 | GTEX-131XF | 1 | 60-69 | 0 | 0 | 7.4 | Blood Vessel | 1621 | 180 | Actual Death | |
| GTEX-131XG-0826-SM-5LZVS | GTEX-131XG | 2 | 50-59 | 0 | 1 | 6.2 | Blood Vessel | 1621 | 101 | Actual Death | |
| GTEX-131YS-1226-SM-5K7VE | GTEX-131YS | 2 | 60-69 | 2 | 1 | 5.8 | Blood Vessel | 1621 | 987 | Actual Death | |
| GTEX-132AR-1326-SM-5K7YC | GTEX-132AR | 2 | 50-59 | 0 | 1 | 7.1 | Blood Vessel | 1621 | 103 | Actual Death | |
| GTEX-1399R-1826-SM-5J2M9 | GTEX-1399R | 1 | 30-39 | 0 | 1 | 6.5 | Blood Vessel | 1621 | 145 | Actual Death | |
| GTEX-1399S-0926-SM-5PNVQ | GTEX-1399S | 2 | 30-39 | 0 | 1 | 7.9 | Blood Vessel | 1621 | 85 | Actual Death | |
| GTEX-1399U-0626-SM-5J1NZ | GTEX-1399U | 2 | 50-59 | 0 | 1 | 6.6 | Blood Vessel | 1621 | 159 | Actual Death | |
| GTEX-13CF3-0626-SM-5J1NO | GTEX-13CF3 | 2 | 60-69 | 0 | 1 | 6 | Blood Vessel | 1621 | 137 | Actual Death | |
| GTEX-13FH7-0426-SM-5KM4M | GTEX-13FH7 | 2 | 50-59 | 0 | 0 | 6.8 | Blood Vessel | 1621 | 121 | Actual Death | |
| GTEX-13FHP-1126-SM-5IJDO | GTEX-13FHP | 1 | 50-59 | 4 | 1 | 6 | Blood Vessel | 1621 | 883 | Actual Death | |
| GTEX-13FTW-0926-SM-5J2NJ | GTEX-13FTW | 1 | 40-49 | 0 | 0 | 6.4 | Blood Vessel | 1621 | 155 | Actual Death | |
| GTEX-13FXS-1126-SM-5IJBB | GTEX-13FXS | 1 | 50-59 | 2 | 1 | 6.3 | Blood Vessel | 1621 | 672 | Actual Death | |
| GTEX-13N11-0626-SM-5J1OL | GTEX-13N11 | 2 | 50-59 | 0 | 1 | 7.4 | Blood Vessel | 1621 | 164 | Actual Death | |
| GTEX-13NZA-1126-SM-5MR4K | GTEX-13NZA | 1 | 60-69 | 2 | 1 | 6.1 | Blood Vessel | 1621 | 1369 | Actual Death | |
| GTEX-13O21-2926-SM-5J1OU | GTEX-13O21 | 1 | 50-59 | 0 | 1 | 7 | Blood Vessel | 1621 | 145 | Actual Death | |
| GTEX-13O61-0626-SM-5L3D1 | GTEX-13O61 | 1 | 60-69 | 0 | 1 | 7 | Blood Vessel | 1621 | 144 | Actual Death | |
| GTEX-13OVG-0726-SM-5IJBY | GTEX-13OVG | 1 | 60-69 | 0 | 1 | 6 | Blood Vessel | 1621 | 458 | Actual Death | |
| GTEX-13PL7-1826-SM-5IJDV | GTEX-13PL7 | 2 | 60-69 | 0 | 1 | 8.1 | Blood Vessel | 1621 | 169 | Actual Death | |
| GTEX-13PVR-1126-SM-5S2NX | GTEX-13PVR | 2 | 60-69 | 0 | 1 | 6.7 | Blood Vessel | 1621 | 131 | Actual Death | |
| GTEX-13QBU-0126-SM-5LU3V | GTEX-13QBU | 2 | 40-49 | 0 | 1 | 7 | Blood Vessel | 1621 | 101 | Actual Death | |
| GTEX-13QJC-0626-SM-5S2O9 | GTEX-13QJC | 2 | 60-69 | 2 | 1 | 6.4 | Blood Vessel | 1621 | 1056 | Actual Death | |
| GTEX-13RTJ-0626-SM-5S2NB | GTEX-13RTJ | 1 | 60-69 | 4 | 1 | 3.2 | Blood Vessel | 1621 | 885 | Actual Death | |
| GTEX-13S7M-2226-SM-5S2WB | GTEX-13S7M | 2 | 60-69 | 2 | 1 | 6.3 | Blood Vessel | 1621 | 629 | Actual Death | |
| GTEX-13S86-0526-SM-5QGPZ | GTEX-13S86 | 1 | 40-49 | 0 | 1 | 7.3 | Blood Vessel | 1621 | 158 | Actual Death | |
| GTEX-13U4I-0926-SM-5LU5A | GTEX-13U4I | 2 | 40-49 | 0 | 1 | 7.4 | Blood Vessel | 1621 | 424 | Actual Death | |
| GTEX-13VXT-1026-SM-5LU37 | GTEX-13VXT | 2 | 20-29 | 0 | 1 | 6.5 | Blood Vessel | 1621 | 498 | Actual Death | |
| GTEX-13VXU-1926-SM-5LU5J | GTEX-13VXU | 1 | 50-59 | 2 | 1 | 6.1 | Blood Vessel | 1621 | 1018 | Actual Death | |
| GTEX-13W3W-0626-SM-5LU45 | GTEX-13W3W | 2 | 60-69 | 0 | 1 | 8.5 | Blood Vessel | 1621 | 192 | Actual Death | |
| GTEX-13X6J-1326-SM-5QGOV | GTEX-13X6J | 1 | 50-59 | 2 | 1 | 6.8 | Blood Vessel | 1621 | 1331 | Actual Death | |
| GTEX-1445S-1126-SM-5QGOW | GTEX-1445S | 1 | 60-69 | 3 | 1 | 5.8 | Blood Vessel | 1621 | 808 | Actual Death | |
| GTEX-146FH-0926-SM-5SI96 | GTEX-146FH | 2 | 50-59 | 0 | 1 | 7.2 | Blood Vessel | 1621 | 464 | Actual Death | |
| GTEX-147F4-1326-SM-5LU9V | GTEX-147F4 | 1 | 50-59 | 2 | 1 | 6.7 | Blood Vessel | 1621 | 1265 | Actual Death | |
| GTEX-14C38-1226-SM-5S2UK | GTEX-14C38 | 1 | 50-59 | 0 | 1 | 6.1 | Blood Vessel | 1621 | 562 | Actual Death | |
| GTEX-14C5O-1426-SM-5RQI8 | GTEX-14C5O | 1 | 60-69 | 4 | 1 | 6.9 | Blood Vessel | 1621 | 742 | Actual Death | |
| GTEX-14E1K-0926-SM-5S2U4 | GTEX-14E1K | 1 | 50-59 | 0 | 1 | 6.3 | Blood Vessel | 1621 | 189 | Actual Death | |
| GTEX-NPJ7-1326-SM-3MJHO | GTEX-NPJ7 | 2 | 60-69 | 4 | 1 | 6.7 | Blood Vessel | 1621 | 656 | Presumed Death | |
| GTEX-NPJ8-1326-SM-3LK6B | GTEX-NPJ8 | 1 | 40-49 | 4 | 1 | 7.1 | Blood Vessel | 1621 | 365 | Presumed Death | |
| GTEX-O5YV-0426-SM-3LK66 | GTEX-O5YV | 2 | 60-69 | 3 | 0 | 7.7 | Blood Vessel | 1621 | 252 | Actual Death | |
| GTEX-O5YW-3026-SM-3MJHI | GTEX-O5YW | 1 | 50-59 | 0 | 0 | 7.9 | Blood Vessel | 1621 | 148 | Actual Death | |
| GTEX-OHPL-3026-SM-3MJGS | GTEX-OHPL | 2 | 60-69 | 0 | 1 | 8.5 | Blood Vessel | 1621 | 89 | Actual Death | |
| GTEX-OIZH-3026-SM-3NB1G | GTEX-OIZH | 1 | 50-59 | 0 | 1 | 8.9 | Blood Vessel | 1621 | 123 | Actual Death | |
| GTEX-OOBJ-3026-SM-3NB1D | GTEX-OOBJ | 1 | 60-69 | 0 | 1 | 7.3 | Blood Vessel | 1621 | 117 | Actual Death | |
| GTEX-P4PP-3026-SM-3P61O | GTEX-P4PP | 2 | 30-39 | 0 | 1 | 7.5 | Blood Vessel | 1621 | 91 | Actual Death | |
| GTEX-PSDG-0826-SM-48TCZ | GTEX-PSDG | 1 | 50-59 | 0 | 1 | 7 | Blood Vessel | 1621 | 493 | Actual Death | |
| GTEX-PWCY-0426-SM-48TCW | GTEX-PWCY | 2 | 20-29 | 0 | 0 | 8.4 | Blood Vessel | 1621 | 198 | Actual Death | |
| GTEX-PWOO-0426-SM-48TZF | GTEX-PWOO | 2 | 40-49 | 0 | 1 | 7.6 | Blood Vessel | 1621 | 112 | Actual Death | |
| GTEX-PX3G-3026-SM-48TZR | GTEX-PX3G | 2 | 20-29 | 0 | 1 | 6.6 | Blood Vessel | 1621 | 116 | Actual Death | |
| GTEX-Q2AH-0626-SM-48TZJ | GTEX-Q2AH | 1 | 40-49 | 0 | 1 | 7.6 | Blood Vessel | 1621 | 115 | Actual Death | |
| GTEX-QDVN-0126-SM-4GIC9 | GTEX-QDVN | 1 | 50-59 | 0 | 1 | 8 | Blood Vessel | 1621 | 111 | Actual Death | |
| GTEX-QEG5-1026-SM-4R1KT | GTEX-QEG5 | 1 | 20-29 | 0 | 1 | 7.8 | Blood Vessel | 1621 | 687 | Actual Death | |
| GTEX-QEL4-1026-SM-4R1JK | GTEX-QEL4 | 1 | 50-59 | 3 | 1 | 8.1 | Blood Vessel | 1621 | 535 | Actual Death | |
| GTEX-QESD-0326-SM-47J4F | GTEX-QESD | 1 | 20-29 | 0 | 1 | 7.9 | Blood Vessel | 1621 | 229 | Actual Death | |
| GTEX-QLQ7-0326-SM-4R1JV | GTEX-QLQ7 | 1 | 60-69 | 0 | 1 | 7.5 | Blood Vessel | 1621 | 85 | Actual Death | |
| GTEX-QMRM-0426-SM-4R1K2 | GTEX-QMRM | 1 | 50-59 | 0 | 1 | 8.1 | Blood Vessel | 1621 | 100 | Actual Death | |
| GTEX-QV44-0726-SM-4R1KP | GTEX-QV44 | 1 | 50-59 | 0 | 1 | 7.9 | Blood Vessel | 1621 | 110 | Actual Death | |
| GTEX-R53T-0726-SM-48FCS | GTEX-R53T | 2 | 50-59 | 0 | 0 | 6.6 | Blood Vessel | 1621 | 93 | Actual Death | |
| GTEX-R55G-0426-SM-48FDH | GTEX-R55G | 2 | 40-49 | 0 | 0 | 8.8 | Blood Vessel | 1621 | 83 | Actual Death | |
| GTEX-REY6-0926-SM-48FDA | GTEX-REY6 | 1 | 60-69 | 0 | 1 | 5.8 | Blood Vessel | 1621 | 295 | Actual Death | |
| GTEX-RN64-0726-SM-48FCV | GTEX-RN64 | 1 | 50-59 | 1 | 1 | 6 | Blood Vessel | 1621 | 762 | Actual Death | |
| GTEX-RTLS-0726-SM-46MV4 | GTEX-RTLS | 2 | 60-69 | 4 | 1 | 7 | Blood Vessel | 1621 | 656 | Actual Death | |
| GTEX-RU72-0226-SM-46MUD | GTEX-RU72 | 2 | 50-59 | 2 | 1 | 6 | Blood Vessel | 1621 | 437 | Actual Death | |
| GTEX-RUSQ-0426-SM-47JWR | GTEX-RUSQ | 1 | 50-59 | 0 | 1 | 7.4 | Blood Vessel | 1621 | 194 | Actual Death | |
| GTEX-RWS6-0426-SM-47JXH | GTEX-RWS6 | 2 | 60-69 | 0 | 1 | 6.3 | Blood Vessel | 1621 | 150 | Actual Death | |
| GTEX-S3XE-0226-SM-4AD6I | GTEX-S3XE | 1 | 50-59 | 0 | 1 | 8.1 | Blood Vessel | 1621 | 83 | Actual Death | |
| GTEX-S4Z8-0926-SM-4AD6Q | GTEX-S4Z8 | 1 | 60-69 | 0 | 1 | 7.9 | Blood Vessel | 1621 | 148 | Actual Death | |
| GTEX-SE5C-0426-SM-4BRUI | GTEX-SE5C | 2 | 40-49 | 0 | 1 | 7.7 | Blood Vessel | 1621 | 163 | Actual Death | |
| GTEX-SIU7-0226-SM-4BRX2 | GTEX-SIU7 | 1 | 50-59 | 0 | 1 | 6 | Blood Vessel | 1621 | 75 | Actual Death | |
| GTEX-SNMC-0226-SM-4DM6F | GTEX-SNMC | 1 | 20-29 | 0 | 0 | 8.5 | Blood Vessel | 1621 | 187 | Actual Death | |
| GTEX-U3ZH-0426-SM-4DXSE | GTEX-U3ZH | 1 | 30-39 | 0 | 1 | 8.8 | Blood Vessel | 1621 | 191 | Actual Death | |
| GTEX-U3ZN-0426-SM-4DXSH | GTEX-U3ZN | 2 | 30-39 | 0 | 0 | 8 | Blood Vessel | 1621 | 117 | Actual Death | |
| GTEX-U4B1-0226-SM-4DXU8 | GTEX-U4B1 | 1 | 40-49 | 0 | 0 | 8.3 | Blood Vessel | 1621 | 114 | Actual Death | |
| GTEX-U8XE-1026-SM-4E3HM | GTEX-U8XE | 1 | 30-39 | 4 | 1 | 8.4 | Blood Vessel | 1621 | 404 | Actual Death | |
| GTEX-UJHI-0326-SM-4IHJE | GTEX-UJHI | 2 | 50-59 | 0 | 1 | 6.4 | Blood Vessel | 1621 | 158 | Actual Death | |
| GTEX-UJMC-0426-SM-4IHJF | GTEX-UJMC | 1 | 50-59 | 0 | 1 | 7.2 | Blood Vessel | 1621 | 149 | Actual Death | |
| GTEX-UPIC-0326-SM-4IHJ9 | GTEX-UPIC | 2 | 20-29 | 0 | 0 | 5.7 | Blood Vessel | 1621 | 215 | Actual Death | |
| GTEX-UPK5-0126-SM-3GADM | GTEX-UPK5 | 1 | 40-49 | 0 | 2 | 6.6 | Blood Vessel | 1621 | 971 | Actual Death | |
| GTEX-VUSG-0626-SM-4KL1Z | GTEX-VUSG | 1 | 50-59 | 0 | 1 | 6.9 | Blood Vessel | 1621 | 161 | Actual Death | |
| GTEX-WEY5-0326-SM-4LMI7 | GTEX-WEY5 | 2 | 40-49 | 0 | 1 | 7.3 | Blood Vessel | 1621 | 204 | Actual Death | |
| GTEX-WFG7-0626-SM-4LMK6 | GTEX-WFG7 | 1 | 20-29 | 0 | 0 | 7.1 | Blood Vessel | 1621 | 122 | Actual Death | |
| GTEX-WHPG-0726-SM-4M1XX | GTEX-WHPG | 1 | 50-59 | 0 | 1 | 8.4 | Blood Vessel | 1621 | 251 | Actual Death | |
| GTEX-WHSE-0726-SM-4RTXA | GTEX-WHSE | 1 | 20-29 | 3 | 1 | 7.7 | Blood Vessel | 1621 | 522 | Actual Death | |
| GTEX-WHWD-0226-SM-4OORT | GTEX-WHWD | 1 | 50-59 | 0 | 1 | 6.9 | Blood Vessel | 1621 | 228 | Actual Death | |
| GTEX-WRHU-1126-SM-4E3I1 | GTEX-WRHU | 2 | 50-59 | 1 | 1 | 6.7 | Blood Vessel | 1621 | 524 | Actual Death | |
| GTEX-WY7C-1526-SM-4OND2 | GTEX-WY7C | 1 | 50-59 | 0 | 1 | 8.7 | Blood Vessel | 1621 | 199 | Actual Death | |
| GTEX-WYJK-0926-SM-4ONCF | GTEX-WYJK | 1 | 50-59 | 0 | 1 | 6.5 | Blood Vessel | 1621 | 772 | Actual Death | |
| GTEX-X5EB-0326-SM-4QASF | GTEX-X5EB | 1 | 40-49 | 0 | 1 | 6.4 | Blood Vessel | 1621 | 193 | Actual Death | |
| GTEX-XGQ4-0626-SM-4AT56 | GTEX-XGQ4 | 1 | 50-59 | 0 | 1 | 6.5 | Blood Vessel | 1621 | 148 | Actual Death | |
| GTEX-XPT6-0426-SM-4B672 | GTEX-XPT6 | 1 | 20-29 | 0 | 1 | 7.9 | Blood Vessel | 1621 | 194 | Actual Death | |
| GTEX-XPVG-0926-SM-4B651 | GTEX-XPVG | 1 | 50-59 | 0 | 1 | 8 | Blood Vessel | 1621 | 111 | Actual Death | |
| GTEX-XQ8I-0326-SM-4BOPN | GTEX-XQ8I | 1 | 50-59 | 0 | 1 | 7.1 | Blood Vessel | 1621 | 377 | Actual Death | |
| GTEX-XV7Q-0626-SM-4BRV5 | GTEX-XV7Q | 2 | 40-49 | 0 | 1 | 8.4 | Blood Vessel | 1621 | 70 | Actual Death | |
| GTEX-Y114-0326-SM-4TT99 | GTEX-Y114 | 2 | 50-59 | 0 | 1 | 6.6 | Blood Vessel | 1621 | 95 | Actual Death | |
| GTEX-Y3IK-0926-SM-51MQU | GTEX-Y3IK | 2 | 50-59 | 0 | 1 | 8.7 | Blood Vessel | 1621 | 92 | Actual Death | |
| GTEX-Y5V6-0326-SM-4VBRW | GTEX-Y5V6 | 1 | 60-69 | 0 | 1 | 7.4 | Blood Vessel | 1621 | 114 | Actual Death | |
| GTEX-Y8E4-0226-SM-4VBQ3 | GTEX-Y8E4 | 1 | 40-49 | 0 | 1 | 6.8 | Blood Vessel | 1621 | 365 | Actual Death | |
| GTEX-YB5K-0426-SM-5LUA4 | GTEX-YB5K | 2 | 40-49 | 0 | 1 | 6.4 | Blood Vessel | 1621 | 166 | Actual Death | |
| GTEX-YEC3-0326-SM-5IFJJ | GTEX-YEC3 | 1 | 50-59 | 0 | 1 | 6.6 | Blood Vessel | 1621 | 237 | Actual Death | |
| GTEX-YEC4-0426-SM-4W1ZH | GTEX-YEC4 | 1 | 40-49 | 0 | 1 | 8.6 | Blood Vessel | 1621 | 180 | Actual Death | |
| GTEX-YF7O-0226-SM-5IFJ4 | GTEX-YF7O | 1 | 50-59 | 0 | 1 | 6.6 | Blood Vessel | 1621 | 91 | Actual Death | |
| GTEX-YJ8O-0126-SM-5QGRG | GTEX-YJ8O | 2 | 40-49 | 1 | 1 | 5.8 | Blood Vessel | 1621 | 713 | Actual Death | |
| GTEX-ZAB4-0726-SM-5HL8I | GTEX-ZAB4 | 1 | 40-49 | 4 | 1 | 7.2 | Blood Vessel | 1621 | 501 | Actual Death | |
| GTEX-ZAB5-2726-SM-5J2NH | GTEX-ZAB5 | 1 | 50-59 | 0 | 1 | 7.5 | Blood Vessel | 1621 | 278 | Actual Death | |
| GTEX-ZDYS-0126-SM-5HL6X | GTEX-ZDYS | 1 | 50-59 | 0 | 0 | 8 | Blood Vessel | 1621 | 145 | Actual Death | |
| GTEX-ZF29-0126-SM-4WKGZ | GTEX-ZF29 | 2 | 60-69 | 0 | 0 | 6.1 | Blood Vessel | 1621 | 93 | Actual Death | |
| GTEX-ZF3C-1326-SM-5A5MF | GTEX-ZF3C | 2 | 50-59 | 0 | 1 | 9.4 | Blood Vessel | 1621 | 566 | Actual Death | |
| GTEX-ZGAY-0426-SM-4WWAM | GTEX-ZGAY | 2 | 40-49 | 0 | 1 | 6 | Blood Vessel | 1621 | 154 | Actual Death | |
| GTEX-ZLFU-0126-SM-5EQMN | GTEX-ZLFU | 1 | 40-49 | 0 | 1 | 6.5 | Blood Vessel | 1621 | 90 | Actual Death | |
| GTEX-ZPCL-0326-SM-5FQSG | GTEX-ZPCL | 2 | 60-69 | 0 | 1 | 7.3 | Blood Vessel | 1621 | 78 | Actual Death | |
| GTEX-ZPU1-0526-SM-4YCDA | GTEX-ZPU1 | 1 | 40-49 | 0 | 1 | 9 | Blood Vessel | 1621 | 94 | Actual Death | |
| GTEX-ZQG8-0626-SM-57WF3 | GTEX-ZQG8 | 2 | 60-69 | 0 | 1 | 6.8 | Blood Vessel | 1621 | 148 | Actual Death | |
| GTEX-ZT9W-0426-SM-57WF4 | GTEX-ZT9W | 1 | 50-59 | 0 | 1 | 8.1 | Blood Vessel | 1621 | 90 | Actual Death | |
| GTEX-ZUA1-0426-SM-5NQAF | GTEX-ZUA1 | 1 | 40-49 | 2 | 0 | 5.8 | Blood Vessel | 1621 | 886 | Actual Death | |
| GTEX-ZV7C-0426-SM-51MQY | GTEX-ZV7C | 1 | 50-59 | 0 | 1 | 8.2 | Blood Vessel | 1621 | 104 | Actual Death | |
| GTEX-ZVT2-0526-SM-5E455 | GTEX-ZVT2 | 2 | 50-59 | 0 | 1 | 8.3 | Blood Vessel | 1621 | 92 | Actual Death | |
| GTEX-ZYFC-1226-SM-5GIE4 | GTEX-ZYFC | 1 | 50-59 | 2 | 1 | 6.1 | Blood Vessel | 1621 | 1410 | Actual Death | |
| GTEX-ZYFG-0126-SM-5GIDH | GTEX-ZYFG | 2 | 60-69 | 0 | 1 | 7.3 | Blood Vessel | 1621 | 48 | Actual Death | |
| GTEX-ZYT6-0826-SM-5E43I | GTEX-ZYT6 | 1 | 30-39 | 1 | 1 | 6.6 | Blood Vessel | 1621 | 1430 | Actual Death | |
| GTEX-ZYWO-0426-SM-5SI9A | GTEX-ZYWO | 2 | 40-49 | 0 | 1 | 7.2 | Blood Vessel | 1621 | 79 | Actual Death | |
| Sample | Subject | Gender | Age | DTH-HRDY | SMAT-SSCR | SMRIN | SMTS | SMUBRID | SMTSISCH | SMTSTPTREF | Network |
Variable description
BONOBO-PANDA networks are single-sample networks generated by first estimating single-sample co-expression networks for each sample and then running PANDA on each single-sample co-expression with motif and PPI data. The table below has a description of the primary clinical variables of the gene expression samples that were used to generate the gene regulatory network. It is possible to download each network individually by selecting the sample network to download. The network file has a TF-by-gene (997x26469) matrix named after the GTEx sample reference.
| Sample | Subject | Gender |
Age | DTH-HRDY |
SMAT-SSCR |
SMRIN |
SMTS |
SMUBRID |
Isch. time |
Proxy age |
Net. |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Sample | Subject | Gender | Age | DTH-HRDY | SMAT-SSCR | SMRIN | SMTS | SMUBRID | SMTSISCH | Proxy age | Network |