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Cancer tissues

The cancer tissues resource includes 29 aggregate cancer-specific gene regulatory networks and sample-specific networks for 1,023 glioblastoma patients, 1,638 colon cancer patients, and 150 pancreatic cancer patients, in addition to other cancers derived from TCGA and GEO data.

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Cancer	Tissue	TCGA code	Methods	Network Types	Datasets
Acute Myeloid Leukemia	Blood	LAML	PANDA	Aggregate	TCGA
Adrenocortical carcinoma	Adrenal gland	ACC	PANDA	Aggregate	TCGA
Bladder Urothelial Carcinoma	Bladder	BLCA	PANDA	Aggregate	TCGA
Brain Lower Grade Glioma	Brain	LGG	PANDA	Aggregate	TCGA
Breast invasive carcinoma	Breast	BRCA	OTTER, BONOBO, LIONESS	Aggregate, Single-sample	TCGA, GEO
Cervical squamous cell carcinoma and endocervical adenocarcinoma	Cervix	CESC	OTTER	Aggregate	TCGA
Cholangiocarcinoma	Bile duct	CHOL	PANDA	Aggregate	TCGA
Colon adenocarcinoma	Colon	COAD	PANDA, LIONESS	Aggregate, Single-sample	GEO, TCGA
Esophageal carcinoma	Esophagus	ESCA	PANDA	Aggregate	TCGA
Glioblastoma multiforme	Brain	GBM	PANDA, LIONESS	Aggregate, Single-sample	GGN, TCGA

Showing 1 to 10 of 29 entries

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