GRAND

Cell lines

The cell line resource includes 1,376 sample-specific gene regulatory networks for TF regulation derived from CCLE data, 6 aggregate networks, and 359 genotype-specific networks in normal human cell lines modeling miRNA and TF regulation from GTEx data, and an aggregate miRNA network across all CCLE cell lines.

Click on the bar plot to filter the table below.

Bubble size reflects the number of regulators (TFs/miRNA) in the network. Click on the bubble plot to filter the table below.

Number	Tissue type	Methods	Regulator	Condition	Network types	Datasets
1	All	DRAGON	miRNA	Cancer	aggregate	CCLE
2	Fibroblast	PANDA, PUMA	TF, miRNA	Normal (primary)	aggregate	GTEx
3	LCL	PANDA, PUMA, EGRET	TF, miRNA	Normal (transformed)	aggregate	GTEx
4	Adrenal Cancer	LIONESS	TF	Cancer	single-sample	CCLE
5	Bile Duct Cancer	LIONESS	TF	Cancer	single-sample	CCLE
6	Bladder Cancer	LIONESS	TF	Cancer	single-sample	CCLE
7	Bone Cancer	LIONESS	TF	Cancer	single-sample	CCLE
8	Brain Cancer	LIONESS	TF	Cancer	single-sample	CCLE
9	Breast Cancer	LIONESS	TF	Cancer	single-sample	CCLE
10	Cervical Cancer	LIONESS	TF	Cancer	single-sample	CCLE
11	Colon/Colorectal Cancer	LIONESS	TF	Cancer	single-sample	CCLE
12	Embryonal Cancer	LIONESS	TF	Cancer	single-sample	CCLE
13	Endometrial/Uterine Cancer	LIONESS	TF	Cancer	single-sample	CCLE
14	Engineered	LIONESS	TF	Cancer	single-sample	CCLE
15	Esophageal Cancer	LIONESS	TF	Cancer	single-sample	CCLE
16	Eye Cancer	LIONESS	TF	Cancer	single-sample	CCLE
17	Fibroblast	LIONESS	TF	Cancer	single-sample	CCLE
18	Gallbladder Cancer	LIONESS	TF	Cancer	single-sample	CCLE
19	Gastric Cancer	LIONESS	TF	Cancer	single-sample	CCLE
20	Head and Neck Cancer	LIONESS	TF	Cancer	single-sample	CCLE
21	Kidney Cancer	LIONESS	TF	Cancer	single-sample	CCLE
22	Leukemia	LIONESS	TF	Cancer	single-sample	CCLE
23	Liposarcoma	LIONESS	TF	Cancer	single-sample	CCLE
24	Liver Cancer	LIONESS	TF	Cancer	single-sample	CCLE
25	Lung Cancer	LIONESS	TF	Cancer	single-sample	CCLE
26	Lymphoma	LIONESS	TF	Cancer	single-sample	CCLE
27	Myeloma	LIONESS	TF	Cancer	single-sample	CCLE
28	Neuroblastoma	LIONESS	TF	Cancer	single-sample	CCLE
29	Ovarian Cancer	LIONESS	TF	Cancer	single-sample	CCLE
30	Pancreatic Cancer	LIONESS	TF	Cancer	single-sample	CCLE
31	Prostate Cancer	LIONESS	TF	Cancer	single-sample	CCLE
32	Rhabdoid	LIONESS	TF	Cancer	single-sample	CCLE
33	Sarcoma	LIONESS	TF	Cancer	single-sample	CCLE
34	Skin Cancer	LIONESS	TF	Cancer	single-sample	CCLE
35	Teratoma	LIONESS	TF	Cancer	single-sample	CCLE
36	Thyroid Cancer	LIONESS	TF	Cancer	single-sample	CCLE
37	IPSC	EGRET, PANDA	TF	Normal	aggregate	Banovich et al.
38	IPSC-Cardiomyocyte	EGRET, PANDA	TF	Normal	aggregate	Banovich et al.
39	K562	EGRET	TF	Normal	aggregate	ENCODE
40	GM12878	EGRET	TF	Normal	aggregate	ENCODE

Cell lines

Cancer types