GRAND

Hover over the bar plot to get the GO term. Differentially targeted genes and TFs were computed by comparing a cancer network to all other cancers.

Tool description

PANDA reconstructs a gene regulatory network using TF PPI, TF DNA binding motif, and gene expression samples. You can check the phenotypic information for the clinical variables of the samples that were used to reconstruct the network.

#	Tissue	Tool	netZoo release	Network	PPI	Motif	Expression	TFs	Genes	Data	Samples	Precision	Reference
1	Adrenocortical carcinoma	PANDA	netZooR 0.9	Adj Code Vis				644	29375	TCGA	79	D

Variable description

This is a description of the primary clinical variables of the gene expression samples that were used to generate the gene regulatory network.

Sample	Gender	Race	Stage	Vital status	Age	Days to last follow up	Tumor ID
TCGA-OR-A5J5-01A	MALE	WHITE	Stage III	Dead	30.0	[Not Available]	ACC
TCGA-OR-A5K4-01A	FEMALE	WHITE	Stage III	Alive	64.0	528	ACC
TCGA-OR-A5KU-01A	FEMALE	WHITE	Stage II	Alive	37.0	4673	ACC
TCGA-OR-A5JK-01A	MALE	WHITE	Stage IV	Alive	49.0	1255	ACC
TCGA-OR-A5J8-01A	MALE	WHITE	Stage III	Dead	66.0	[Not Available]	ACC
TCGA-OR-A5KW-01A	FEMALE	WHITE	Stage III	Alive	55.0	1525	ACC
TCGA-OR-A5L9-01A	FEMALE	WHITE	Stage II	Alive	53.0	645	ACC
TCGA-OR-A5KY-01A	FEMALE	WHITE	Stage IV	Dead	23.0	[Not Available]	ACC
TCGA-OR-A5J3-01A	FEMALE	WHITE	Stage III	Alive	23.0	1942	ACC
TCGA-PA-A5YG-01A	MALE	WHITE	Stage II	Alive	51.0	470	ACC
TCGA-OR-A5JW-01A	MALE	WHITE	Stage II	Alive	47.0	1924	ACC
TCGA-OR-A5LN-01A	FEMALE	[Not Evaluated]	Stage II	Alive	31.0	1916	ACC
TCGA-OR-A5JO-01A	FEMALE	WHITE	Stage I	Alive	26.0	889	ACC
TCGA-OR-A5JD-01A	FEMALE	WHITE	Stage II	Alive	57.0	2782	ACC
TCGA-PK-A5H8-01A	MALE	WHITE	Stage II	Alive	42.0	3240	ACC
TCGA-OR-A5JJ-01A	MALE	WHITE	Stage IV	Alive	65.0	309	ACC
TCGA-OR-A5JE-01A	FEMALE	WHITE	Stage I	Dead	17.0	[Not Available]	ACC
TCGA-OR-A5LT-01A	MALE	[Not Evaluated]	Stage III	Alive	57.0	365	ACC
TCGA-OR-A5L4-01A	FEMALE	WHITE	Stage III	Alive	48.0	724	ACC
TCGA-OR-A5LB-01A	MALE	WHITE	Stage IV	Dead	59.0	[Not Available]	ACC
TCGA-OR-A5JI-01A	MALE	WHITE	Stage I	Alive	22.0	1424	ACC
TCGA-OR-A5JZ-01A	MALE	WHITE	Stage II	Alive	60.0	211	ACC
TCGA-OR-A5LR-01A	FEMALE	[Not Evaluated]	Stage II	Alive	30.0	639	ACC
TCGA-OR-A5LG-01A	MALE	WHITE	Stage III	Alive	46.0	1589	ACC
TCGA-OR-A5K8-01A	MALE	WHITE	Stage II	Alive	39.0	504	ACC
TCGA-OR-A5JS-01A	FEMALE	WHITE	Stage II	Alive	65.0	383	ACC
TCGA-OR-A5JR-01A	MALE	WHITE	Stage I	Alive	45.0	3688	ACC
TCGA-OR-A5JA-01A	FEMALE	WHITE	Stage IV	Dead	53.0	[Not Available]	ACC
TCGA-OR-A5JP-01A	MALE	WHITE	Stage II	Alive	40.0	149	ACC
TCGA-OR-A5JQ-01A	FEMALE	WHITE	Stage II	Alive	26.0	674	ACC
TCGA-PK-A5HA-01A	MALE	[Unknown]	Stage I	Alive	63.0	830	ACC
TCGA-OR-A5LA-01A	FEMALE	WHITE	Stage II	Alive	52.0	487	ACC
TCGA-PK-A5H9-01A	FEMALE	ASIAN	Stage II	Alive	27.0	307	ACC
TCGA-OR-A5KO-01A	FEMALE	WHITE	Stage IV	Alive	39.0	1414	ACC
TCGA-OR-A5JB-01A	MALE	WHITE	Stage IV	Dead	52.0	[Not Available]	ACC
TCGA-P6-A5OG-01A	FEMALE	WHITE	Stage IV	Dead	45.0	[Not Available]	ACC
TCGA-OR-A5KZ-01A	MALE	WHITE	Stage II	Dead	42.0	[Not Available]	ACC
TCGA-OR-A5J9-01A	FEMALE	WHITE	Stage II	Alive	22.0	1183	ACC
TCGA-OR-A5LK-01A	MALE	[Not Evaluated]	Stage II	Alive	62.0	2222	ACC
TCGA-OR-A5K2-01A	FEMALE	WHITE	Stage III	Dead	32.0	[Not Available]	ACC
TCGA-OR-A5L8-01A	FEMALE	WHITE	Stage II	Alive	36.0	555	ACC
TCGA-OR-A5KV-01A	FEMALE	WHITE	Stage III	Alive	17.0	3659	ACC
TCGA-OR-A5LH-01A	FEMALE	WHITE	Stage II	Dead	36.0	[Not Available]	ACC
TCGA-OR-A5J7-01A	FEMALE	WHITE	Stage III	Dead	30.0	[Not Available]	ACC
TCGA-OR-A5L6-01A	MALE	WHITE	Stage II	Alive	60.0	628	ACC
TCGA-OR-A5K6-01A	FEMALE	WHITE	Stage II	Alive	56.0	1130	ACC
TCGA-P6-A5OF-01A	FEMALE	WHITE	Stage III	Dead	55.0	[Not Available]	ACC
TCGA-OR-A5JY-01A	FEMALE	WHITE	Stage IV	Dead	68.0	[Not Available]	ACC
TCGA-OU-A5PI-01A	FEMALE	WHITE	Stage IV	Alive	53.0	709	ACC
TCGA-OR-A5LP-01A	FEMALE	[Not Evaluated]	Stage II	Alive	37.0	1583	ACC
TCGA-OR-A5LE-01A	MALE	WHITE	Stage II	Dead	14.0	[Not Available]	ACC
TCGA-OR-A5K1-01A	MALE	WHITE	Stage II	Alive	48.0	2723	ACC
TCGA-OR-A5J6-01A	FEMALE	BLACK OR AFRICAN AMERICAN	Stage II	Alive	29.0	2428	ACC
TCGA-OR-A5K5-01A	FEMALE	WHITE	Stage III	Alive	59.0	253	ACC
TCGA-OR-A5JM-01A	FEMALE	WHITE	Stage IV	Dead	25.0	[Not Available]	ACC
TCGA-OR-A5LC-01A	FEMALE	WHITE	Stage IV	Dead	71.0	[Not Available]	ACC
TCGA-OR-A5J2-01A	FEMALE	WHITE	Stage IV	Dead	44.0	[Not Available]	ACC
TCGA-OR-A5J1-01A	MALE	WHITE	Stage II	Dead	58.0	[Not Available]	ACC
TCGA-OR-A5JV-01A	MALE	WHITE	Stage II	Alive	55.0	1541	ACC
TCGA-OR-A5K9-01A	FEMALE	WHITE	Stage II	Dead	61.0	[Not Available]	ACC
TCGA-OR-A5K0-01A	FEMALE	WHITE	Stage II	Alive	69.0	1029	ACC
TCGA-OR-A5JG-01A	MALE	WHITE	Stage IV	Dead	61.0	[Not Available]	ACC
TCGA-OR-A5LO-01A	FEMALE	[Not Evaluated]	Stage II	Alive	61.0	1949	ACC
TCGA-OR-A5JF-01A	FEMALE	WHITE	Stage II	Alive	69.0	1259	ACC
TCGA-OR-A5JX-01A	MALE	WHITE	Stage III	Alive	50.0	950	ACC
TCGA-OR-A5KT-01A	FEMALE	WHITE	Stage I	Alive	44.0	2673	ACC
TCGA-OR-A5LD-01A	MALE	WHITE	Stage III	Dead	52.0	[Not Available]	ACC
TCGA-OR-A5LJ-01A	FEMALE	WHITE	Stage IV	Dead	54.0	[Not Available]	ACC
TCGA-OR-A5KX-01A	FEMALE	WHITE	Stage III	Alive	25.0	1091	ACC
TCGA-OR-A5LM-01A	MALE	[Not Evaluated]	Stage II	Alive	23.0	1858	ACC
TCGA-PK-A5HB-01A	MALE	[Unknown]	[Not Available]	Alive	63.0	1293	ACC
TCGA-OR-A5L3-01A	FEMALE	WHITE	Stage I	Alive	67.0	3897	ACC
TCGA-OR-A5LS-01A	FEMALE	[Not Evaluated]	Stage II	Alive	34.0	882	ACC
TCGA-OR-A5LL-01A	FEMALE	[Not Evaluated]	Stage II	Dead	75.0	[Not Available]	ACC
TCGA-OR-A5L5-01A	FEMALE	WHITE	Stage I	Alive	77.0	840	ACC
TCGA-OR-A5K3-01A	MALE	WHITE	Stage II	Alive	53.0	2842	ACC
TCGA-OR-A5JL-01A	FEMALE	WHITE	Stage I	Alive	36.0	670	ACC
TCGA-OR-A5JC-01A	MALE	WHITE	[Not Available]	Dead	37.0	[Not Available]	ACC
TCGA-OR-A5JT-01A	FEMALE	WHITE	Stage II	Alive	65.0	488	ACC
Sample	Gender	Race	Stage	Status	Age	Days to follow up	Tumor ID

ACC cancer networks

Networks

Tool description

Phenotypic information TCGA

Variable description