GRAND

Hover over the bar plot to get the GO term. Differentially targeted genes and TFs were computed by comparing a cancer network to all other cancers.

Tool description

PANDA reconstructs a gene regulatory network using TF PPI, TF DNA binding motif, and gene expression samples. You can check the phenotypic information for the clinical variables of the samples that were used to reconstruct the network.

#	Tissue	Tool	netZoo release	Network	PPI	Motif	Expression	Regulator	nReg	Genes	Data	Samples	Precision	Reference
1	Lymphoid Neoplasm Diffuse Large B-cell Lymphoma	PANDA	netZooR 0.9	Adj Code Vis				TF	644	29375	TCGA	48	D

Variable description

This is a description of the primary clinical variables of the gene expression samples that were used to generate the gene regulatory network.

Sample	Gender	Race	Stage	Vital status	Age	Days to last follow up	Tumor ID
TCGA-FA-A6HO-01A	FEMALE	ASIAN	[Not Applicable]	Alive	58	6	DLBC
TCGA-G8-6909-01A	MALE	WHITE	[Not Applicable]	Alive	67	3227	DLBC
TCGA-GR-7353-01A	MALE	WHITE	[Not Applicable]	Alive	36	2254	DLBC
TCGA-FA-A6HN-01A	MALE	ASIAN	[Not Applicable]	Alive	73	6	DLBC
TCGA-FF-8043-01A	FEMALE	ASIAN	[Not Applicable]	Alive	70	580	DLBC
TCGA-G8-6326-01A	MALE	WHITE	[Not Applicable]	Alive	52	1162	DLBC
TCGA-FF-8062-01A	FEMALE	ASIAN	[Not Applicable]	Alive	60	259	DLBC
TCGA-G8-6324-01A	FEMALE	BLACK OR AFRICAN AMERICAN	[Not Applicable]	Dead	43	[Not Available]	DLBC
TCGA-GS-A9TW-01A	FEMALE	WHITE	[Not Applicable]	Alive	23	1245	DLBC
TCGA-GR-A4D5-01A	FEMALE	WHITE	[Not Applicable]	Alive	46	751	DLBC
TCGA-VB-A8QN-01A	MALE	WHITE	[Not Applicable]	Alive	55	0	DLBC
TCGA-GR-A4D9-01B	FEMALE	WHITE	[Not Applicable]	Alive	66	1408	DLBC
TCGA-FM-8000-01A	FEMALE	WHITE	[Not Applicable]	Alive	70	139	DLBC
TCGA-FA-A4BB-01A	MALE	WHITE	[Not Applicable]	Alive	67	-10	DLBC
TCGA-FF-8042-01A	FEMALE	ASIAN	[Not Applicable]	Alive	57	608	DLBC
TCGA-FA-A82F-01A	FEMALE	ASIAN	[Not Applicable]	Alive	48	25	DLBC
TCGA-G8-6914-01A	MALE	WHITE	[Not Applicable]	Alive	67	5616	DLBC
TCGA-GS-A9U4-01A	FEMALE	WHITE	[Not Applicable]	Dead	27	[Not Available]	DLBC
TCGA-G8-6906-01A	MALE	WHITE	[Not Applicable]	Dead	58	[Not Available]	DLBC
TCGA-GS-A9TV-01A	FEMALE	WHITE	[Not Applicable]	Alive	40	380	DLBC
TCGA-FF-A7CX-01A	MALE	ASIAN	[Not Applicable]	Alive	46	385	DLBC
TCGA-GR-7351-01A	FEMALE	WHITE	[Not Applicable]	Alive	56	3872	DLBC
TCGA-FA-A7DS-01A	FEMALE	ASIAN	[Not Applicable]	Alive	54	11	DLBC
TCGA-FF-A7CR-01A	MALE	ASIAN	[Not Applicable]	Dead	61	[Not Available]	DLBC
TCGA-FF-A7CW-01A	MALE	ASIAN	[Not Applicable]	Alive	72	402	DLBC
TCGA-RQ-AAAT-01A	FEMALE	WHITE	[Not Applicable]	Alive	63	17	DLBC
TCGA-GS-A9U3-01A	FEMALE	WHITE	[Not Applicable]	Alive	77	2717	DLBC
TCGA-GS-A9TZ-01A	MALE	WHITE	[Not Applicable]	Alive	51	415	DLBC
TCGA-GR-A4D6-01A	FEMALE	ASIAN	[Not Applicable]	Alive	54	911	DLBC
TCGA-FA-A86F-01A	FEMALE	WHITE	[Not Applicable]	Alive	64	0	DLBC
TCGA-FA-A4XK-01A	MALE	ASIAN	[Not Applicable]	Alive	40	62	DLBC
TCGA-FF-8046-01A	MALE	ASIAN	[Not Applicable]	Alive	51	377	DLBC
TCGA-GS-A9TQ-01A	FEMALE	WHITE	[Not Applicable]	Alive	69	576	DLBC
TCGA-GS-A9TU-01A	MALE	WHITE	[Not Applicable]	Alive	45	3414	DLBC
TCGA-FA-8693-01A	MALE	WHITE	[Not Applicable]	Alive	75	35	DLBC
TCGA-G8-6325-01A	MALE	WHITE	[Not Applicable]	Alive	69	1266	DLBC
TCGA-RQ-A68N-01A	MALE	WHITE	[Not Applicable]	Alive	63	32	DLBC
TCGA-RQ-A6JB-01A	FEMALE	WHITE	[Not Applicable]	Alive	62	1	DLBC
TCGA-FA-A7Q1-01A	FEMALE	ASIAN	[Not Applicable]	Alive	61	22	DLBC
TCGA-FF-A7CQ-01A	MALE	ASIAN	[Not Applicable]	Alive	74	298	DLBC
TCGA-FF-8047-01A	FEMALE	ASIAN	[Not Applicable]	Alive	38	126	DLBC
TCGA-G8-6907-01A	FEMALE	WHITE	[Not Applicable]	Dead	57	[Not Available]	DLBC
TCGA-FF-8061-01A	MALE	ASIAN	[Not Applicable]	Alive	42	433	DLBC
TCGA-GR-A4D4-01A	FEMALE	WHITE	[Not Applicable]	Alive	57	812	DLBC
TCGA-FF-8041-01A	FEMALE	ASIAN	[Not Applicable]	Alive	28	626	DLBC
TCGA-GS-A9TY-01A	FEMALE	WHITE	[Not Applicable]	Alive	82	2616	DLBC
TCGA-GS-A9TX-01A	MALE	WHITE	[Not Applicable]	Alive	37	887	DLBC
TCGA-GS-A9TT-01A	MALE	WHITE	[Not Applicable]	Alive	70	844	DLBC
Sample	Gender	Race	Stage	Status	Age	Days to follow up	Tumor ID

DLBC cancer networks

Networks

Tool description

Phenotypic information TCGA

Variable description