GRAND

Hover over the bar plot to get the GO term. Differentially targeted genes and TFs were computed by comparing a cancer network to all other cancers.

Tool description

PANDA reconstructs a gene regulatory network using TF PPI, TF DNA binding motif, and gene expression samples. You can check the phenotypic information for the clinical variables of the samples that were used to reconstruct the network.

#	Tissue	Tool	netZoo release	Network	PPI	Motif	Expression	TFs	Genes	Data	Samples	Precision	Reference
1	Lymphoid Neoplasm Diffuse Large B-cell Lymphoma	PANDA	netZooR 0.9	Adj Code Vis				644	29375	TCGA	48	D

Variable description

This is a description of the primary clinical variables of the gene expression samples that were used to generate the gene regulatory network.

Sample	Gender	Race	Stage	Vital status	Age	Days to last follow up	Tumor ID
TCGA-FA-A6HO-01A	FEMALE	ASIAN	[Not Applicable]	Alive	58.0	6	DLBC
TCGA-G8-6909-01A	MALE	WHITE	[Not Applicable]	Alive	67.0	3227	DLBC
TCGA-GR-7353-01A	MALE	WHITE	[Not Applicable]	Alive	36.0	2254	DLBC
TCGA-FA-A6HN-01A	MALE	ASIAN	[Not Applicable]	Alive	73.0	6	DLBC
TCGA-FF-8043-01A	FEMALE	ASIAN	[Not Applicable]	Alive	70.0	580	DLBC
TCGA-G8-6326-01A	MALE	WHITE	[Not Applicable]	Alive	52.0	1162	DLBC
TCGA-FF-8062-01A	FEMALE	ASIAN	[Not Applicable]	Alive	60.0	259	DLBC
TCGA-G8-6324-01A	FEMALE	BLACK OR AFRICAN AMERICAN	[Not Applicable]	Dead	43.0	[Not Available]	DLBC
TCGA-GS-A9TW-01A	FEMALE	WHITE	[Not Applicable]	Alive	23.0	1245	DLBC
TCGA-GR-A4D5-01A	FEMALE	WHITE	[Not Applicable]	Alive	46.0	751	DLBC
TCGA-VB-A8QN-01A	MALE	WHITE	[Not Applicable]	Alive	55.0	0	DLBC
TCGA-GR-A4D9-01B	FEMALE	WHITE	[Not Applicable]	Alive	66.0	1408	DLBC
TCGA-FM-8000-01A	FEMALE	WHITE	[Not Applicable]	Alive	70.0	139	DLBC
TCGA-FA-A4BB-01A	MALE	WHITE	[Not Applicable]	Alive	67.0	-10	DLBC
TCGA-FF-8042-01A	FEMALE	ASIAN	[Not Applicable]	Alive	57.0	608	DLBC
TCGA-FA-A82F-01A	FEMALE	ASIAN	[Not Applicable]	Alive	48.0	25	DLBC
TCGA-G8-6914-01A	MALE	WHITE	[Not Applicable]	Alive	67.0	5616	DLBC
TCGA-GS-A9U4-01A	FEMALE	WHITE	[Not Applicable]	Dead	27.0	[Not Available]	DLBC
TCGA-G8-6906-01A	MALE	WHITE	[Not Applicable]	Dead	58.0	[Not Available]	DLBC
TCGA-GS-A9TV-01A	FEMALE	WHITE	[Not Applicable]	Alive	40.0	380	DLBC
TCGA-FF-A7CX-01A	MALE	ASIAN	[Not Applicable]	Alive	46.0	385	DLBC
TCGA-GR-7351-01A	FEMALE	WHITE	[Not Applicable]	Alive	56.0	3872	DLBC
TCGA-FA-A7DS-01A	FEMALE	ASIAN	[Not Applicable]	Alive	54.0	11	DLBC
TCGA-FF-A7CR-01A	MALE	ASIAN	[Not Applicable]	Dead	61.0	[Not Available]	DLBC
TCGA-FF-A7CW-01A	MALE	ASIAN	[Not Applicable]	Alive	72.0	402	DLBC
TCGA-RQ-AAAT-01A	FEMALE	WHITE	[Not Applicable]	Alive	63.0	17	DLBC
TCGA-GS-A9U3-01A	FEMALE	WHITE	[Not Applicable]	Alive	77.0	2717	DLBC
TCGA-GS-A9TZ-01A	MALE	WHITE	[Not Applicable]	Alive	51.0	415	DLBC
TCGA-GR-A4D6-01A	FEMALE	ASIAN	[Not Applicable]	Alive	54.0	911	DLBC
TCGA-FA-A86F-01A	FEMALE	WHITE	[Not Applicable]	Alive	64.0	0	DLBC
TCGA-FA-A4XK-01A	MALE	ASIAN	[Not Applicable]	Alive	40.0	62	DLBC
TCGA-FF-8046-01A	MALE	ASIAN	[Not Applicable]	Alive	51.0	377	DLBC
TCGA-GS-A9TQ-01A	FEMALE	WHITE	[Not Applicable]	Alive	69.0	576	DLBC
TCGA-GS-A9TU-01A	MALE	WHITE	[Not Applicable]	Alive	45.0	3414	DLBC
TCGA-FA-8693-01A	MALE	WHITE	[Not Applicable]	Alive	75.0	35	DLBC
TCGA-G8-6325-01A	MALE	WHITE	[Not Applicable]	Alive	69.0	1266	DLBC
TCGA-RQ-A68N-01A	MALE	WHITE	[Not Applicable]	Alive	63.0	32	DLBC
TCGA-RQ-A6JB-01A	FEMALE	WHITE	[Not Applicable]	Alive	62.0	1	DLBC
TCGA-FA-A7Q1-01A	FEMALE	ASIAN	[Not Applicable]	Alive	61.0	22	DLBC
TCGA-FF-A7CQ-01A	MALE	ASIAN	[Not Applicable]	Alive	74.0	298	DLBC
TCGA-FF-8047-01A	FEMALE	ASIAN	[Not Applicable]	Alive	38.0	126	DLBC
TCGA-G8-6907-01A	FEMALE	WHITE	[Not Applicable]	Dead	57.0	[Not Available]	DLBC
TCGA-FF-8061-01A	MALE	ASIAN	[Not Applicable]	Alive	42.0	433	DLBC
TCGA-GR-A4D4-01A	FEMALE	WHITE	[Not Applicable]	Alive	57.0	812	DLBC
TCGA-FF-8041-01A	FEMALE	ASIAN	[Not Applicable]	Alive	28.0	626	DLBC
TCGA-GS-A9TY-01A	FEMALE	WHITE	[Not Applicable]	Alive	82.0	2616	DLBC
TCGA-GS-A9TX-01A	MALE	WHITE	[Not Applicable]	Alive	37.0	887	DLBC
TCGA-GS-A9TT-01A	MALE	WHITE	[Not Applicable]	Alive	70.0	844	DLBC
Sample	Gender	Race	Stage	Status	Age	Days to follow up	Tumor ID

DLBC cancer networks

Networks

Tool description

Phenotypic information TCGA

Variable description