Hover over the bar plot to get the GO term. Differentially targeted genes and TFs were computed by comparing a cancer network to all other cancers.
Tool description
PANDA reconstructs a gene regulatory network using TF PPI, TF DNA binding motif, and gene expression samples. You can check the phenotypic information for the clinical variables of the samples that were used to reconstruct the network.
| # | Tissue | Tool | netZoo release | Network |
PPI |
Motif | Expression | TFs | Genes | Data | Samples | Precision |
Reference |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | Esophageal carcinoma | PANDA | netZooR 0.9 | 644 | 29375 | TCGA | 161 | D |
Variable description
This is a description of the primary clinical variables of the gene expression samples that were used to generate the gene regulatory network.
| Sample |
Gender | Race | Stage |
Vital status | Age |
Days to last follow up | Tumor ID |
|---|---|---|---|---|---|---|---|
| TCGA-JY-A93E-01A | MALE | WHITE | Stage IIIA | Alive | - | 550 | ESCA |
| TCGA-LN-A49P-01A | MALE | ASIAN | Stage IIA | Alive | - | 0 | ESCA |
| TCGA-VR-A8ER-01A | MALE | [Unknown] | Stage III | Dead | - | [Not Available] | ESCA |
| TCGA-L5-A4OG-01A | FEMALE | WHITE | Stage I | Alive | - | 102 | ESCA |
| TCGA-Z6-A8JD-01A | MALE | WHITE | Stage IIB | Alive | - | 20 | ESCA |
| TCGA-2H-A9GF-01A | MALE | [Unknown] | Stage III | Dead | - | [Not Available] | ESCA |
| TCGA-2H-A9GN-01A | MALE | [Unknown] | Stage III | Dead | - | [Not Available] | ESCA |
| TCGA-KH-A6WC-01A | MALE | WHITE | Stage IA | Alive | - | 189 | ESCA |
| TCGA-L5-A893-01A | FEMALE | WHITE | Stage I | Alive | - | 92 | ESCA |
| TCGA-LN-A8I0-01A | MALE | ASIAN | Stage IIA | Alive | - | 0 | ESCA |
| TCGA-IG-A97I-01A | MALE | WHITE | Stage IIA | Alive | - | -4 | ESCA |
| TCGA-IG-A97H-01A | MALE | ASIAN | Stage IIA | Alive | - | 13 | ESCA |
| TCGA-V5-AASV-01A | MALE | BLACK OR AFRICAN AMERICAN | Stage IIB | Alive | - | 258 | ESCA |
| TCGA-L5-A8NM-01A | FEMALE | WHITE | Stage IIB | Dead | - | [Not Available] | ESCA |
| TCGA-L5-A8NJ-01A | MALE | WHITE | Stage III | Alive | - | 501 | ESCA |
| TCGA-L5-A8NN-01A | MALE | WHITE | Stage III | Alive | - | 165 | ESCA |
| TCGA-L5-A43C-01A | MALE | WHITE | [Not Available] | Alive | - | 96 | ESCA |
| TCGA-L5-A8NF-01A | MALE | WHITE | Stage IVA | Dead | - | [Not Available] | ESCA |
| TCGA-2H-A9GH-01A | MALE | [Unknown] | Stage IIB | Dead | - | [Not Available] | ESCA |
| TCGA-LN-A9FP-01A | FEMALE | ASIAN | Stage IIA | Alive | - | 0 | ESCA |
| TCGA-JY-A6FD-01A | FEMALE | ASIAN | Stage IIA | Alive | - | 1638 | ESCA |
| TCGA-L5-A4OM-01A | FEMALE | WHITE | Stage IA | Alive | - | 124 | ESCA |
| TCGA-LN-A9FR-01A | MALE | ASIAN | Stage IIB | Alive | - | 0 | ESCA |
| TCGA-R6-A6XQ-01B | MALE | WHITE | [Not Available] | Dead | - | [Not Available] | ESCA |
| TCGA-V5-AASX-01A | MALE | WHITE | [Not Available] | Alive | - | 135 | ESCA |
| TCGA-LN-A49S-01A | MALE | ASIAN | Stage IIA | Alive | - | 4 | ESCA |
| TCGA-IG-A7DP-01A | FEMALE | WHITE | Stage IIIA | Alive | - | 34 | ESCA |
| TCGA-LN-A9FO-01A | MALE | ASIAN | Stage IIA | Alive | - | 4 | ESCA |
| TCGA-L5-A4OP-01A | FEMALE | WHITE | Stage IA | Alive | - | 218 | ESCA |
| TCGA-S8-A6BV-01A | MALE | WHITE | Stage IIIA | Alive | - | 267 | ESCA |
| TCGA-Z6-AAPN-01A | MALE | WHITE | Stage IIA | Alive | - | 18 | ESCA |
| TCGA-R6-A6DN-01B | MALE | WHITE | [Not Available] | Dead | - | [Not Available] | ESCA |
| TCGA-L5-A8NU-01A | MALE | WHITE | Stage IIA | Dead | - | [Not Available] | ESCA |
| TCGA-V5-A7RC-01B | MALE | BLACK OR AFRICAN AMERICAN | [Not Available] | Dead | - | [Not Available] | ESCA |
| TCGA-R6-A6KZ-01A | MALE | WHITE | [Not Available] | Dead | - | [Not Available] | ESCA |
| TCGA-IC-A6RF-01A | FEMALE | WHITE | Stage IA | Alive | - | 189 | ESCA |
| TCGA-L5-A8NG-01A | MALE | WHITE | Stage III | Alive | - | 1094 | ESCA |
| TCGA-ZR-A9CJ-01B | MALE | WHITE | Stage IIIC | Alive | - | 551 | ESCA |
| TCGA-L5-A88S-01A | MALE | WHITE | Stage IB | Alive | - | 211 | ESCA |
| TCGA-L5-A4OU-01A | MALE | WHITE | Stage IIA | Alive | - | 882 | ESCA |
| TCGA-IG-A3YA-01A | MALE | WHITE | Stage IIIA | Alive | - | 0 | ESCA |
| TCGA-2H-A9GI-01A | MALE | [Unknown] | Stage III | Dead | - | [Not Available] | ESCA |
| TCGA-L5-A88Z-01A | FEMALE | WHITE | Stage IIA | Alive | - | 225 | ESCA |
| TCGA-VR-A8EZ-01A | MALE | WHITE | Stage IIIC | Dead | - | [Not Available] | ESCA |
| TCGA-JY-A6FH-01A | MALE | WHITE | Stage IIB | Alive | - | 1098 | ESCA |
| TCGA-V5-AASW-01A | MALE | WHITE | [Not Available] | Alive | - | 248 | ESCA |
| TCGA-JY-A6FG-01A | MALE | WHITE | Stage III | Dead | - | [Not Available] | ESCA |
| TCGA-2H-A9GM-01A | MALE | [Unknown] | Stage IIB | Dead | - | [Not Available] | ESCA |
| TCGA-2H-A9GJ-01A | MALE | [Unknown] | Stage I | Dead | - | [Not Available] | ESCA |
| TCGA-VR-AA4G-01A | FEMALE | WHITE | Stage IIIA | Alive | - | 366 | ESCA |
| TCGA-L5-A88Y-01A | MALE | WHITE | [Unknown] | Alive | - | 11 | ESCA |
| TCGA-L5-A8NK-01A | FEMALE | WHITE | Stage IIA | Alive | - | 412 | ESCA |
| TCGA-R6-A6XG-01B | MALE | WHITE | [Not Available] | Alive | - | 900 | ESCA |
| TCGA-VR-A8EO-01A | MALE | WHITE | Stage IIA | Alive | - | 509 | ESCA |
| TCGA-2H-A9GL-01A | MALE | [Unknown] | Stage III | Dead | - | [Not Available] | ESCA |
| TCGA-IG-A6QS-01A | MALE | WHITE | Stage IIB | Alive | - | 4 | ESCA |
| TCGA-JY-A93C-01A | MALE | ASIAN | Stage IIIB | Alive | - | 705 | ESCA |
| TCGA-IG-A3YB-01A | MALE | WHITE | Stage IIIA | Alive | - | 0 | ESCA |
| TCGA-LN-A9FQ-01A | MALE | ASIAN | Stage IIA | Alive | - | 0 | ESCA |
| TCGA-L5-A88V-01A | MALE | WHITE | Stage III | Alive | - | 79 | ESCA |
| TCGA-R6-A8W5-01B | MALE | WHITE | Stage IVA | Dead | - | [Not Available] | ESCA |
| TCGA-L5-A88W-01A | MALE | WHITE | Stage IIA | Dead | - | [Not Available] | ESCA |
| TCGA-2H-A9GG-01A | MALE | [Unknown] | Stage III | Dead | - | [Not Available] | ESCA |
| TCGA-LN-A7HV-01A | MALE | ASIAN | Stage IIA | Alive | - | 0 | ESCA |
| TCGA-R6-A8WC-01A | MALE | WHITE | [Not Available] | Alive | - | 22 | ESCA |
| TCGA-VR-A8EP-01A | MALE | WHITE | Stage IIIB | Alive | - | 474 | ESCA |
| TCGA-R6-A8WG-01A | MALE | WHITE | [Not Available] | Dead | - | [Not Available] | ESCA |
| TCGA-LN-A7HW-01A | MALE | ASIAN | Stage IIA | Alive | - | 0 | ESCA |
| TCGA-IG-A51D-01A | MALE | WHITE | Stage IIB | Alive | - | 0 | ESCA |
| TCGA-LN-A4A4-01A | MALE | ASIAN | Stage III | Alive | - | 3 | ESCA |
| TCGA-L7-A6VZ-01A | MALE | WHITE | Stage IIIC | Alive | - | 266 | ESCA |
| TCGA-R6-A6DQ-01B | FEMALE | WHITE | [Not Available] | Dead | - | [Not Available] | ESCA |
| TCGA-V5-A7RE-01A | MALE | WHITE | Stage IB | Alive | - | 146 | ESCA |
| TCGA-L5-A4OW-01A | FEMALE | [Not Evaluated] | Stage IIB | Dead | - | [Not Available] | ESCA |
| TCGA-IG-A5S3-01A | FEMALE | WHITE | Stage IIB | Alive | - | 0 | ESCA |
| TCGA-XP-A8T6-01A | MALE | BLACK OR AFRICAN AMERICAN | Stage IIB | Dead | - | [Not Available] | ESCA |
| TCGA-LN-A5U5-01A | MALE | ASIAN | Stage IV | Alive | - | 5 | ESCA |
| TCGA-XP-A8T8-01A | MALE | BLACK OR AFRICAN AMERICAN | Stage IIB | Alive | - | 437 | ESCA |
| TCGA-LN-A49W-01A | MALE | ASIAN | Stage III | Alive | - | 2 | ESCA |
| TCGA-JY-A939-01A | MALE | WHITE | Stage IIB | Alive | - | 471 | ESCA |
| TCGA-L5-A8NI-01A | MALE | WHITE | Stage III | Dead | - | [Not Available] | ESCA |
| TCGA-LN-A5U6-01A | MALE | ASIAN | Stage IIB | Alive | - | 6 | ESCA |
| TCGA-LN-A49Y-01A | MALE | ASIAN | Stage IIA | Alive | - | 2 | ESCA |
| TCGA-Z6-A9VB-01A | MALE | WHITE | Stage IIIA | Alive | - | 15 | ESCA |
| TCGA-JY-A6FA-01A | MALE | ASIAN | Stage IIB | Dead | - | [Not Available] | ESCA |
| TCGA-L5-A43E-01A | MALE | WHITE | Stage I | Alive | - | 105 | ESCA |
| TCGA-L5-A4OE-01A | MALE | WHITE | Stage IIIB | Alive | - | 107 | ESCA |
| TCGA-LN-A7HX-01A | MALE | ASIAN | Stage IIA | Alive | - | 0 | ESCA |
| TCGA-2H-A9GQ-01A | MALE | [Unknown] | Stage III | Dead | - | [Not Available] | ESCA |
| TCGA-IG-A3YC-01A | MALE | WHITE | Stage IIIA | Alive | - | 0 | ESCA |
| TCGA-VR-A8EW-01A | MALE | ASIAN | Stage IIIB | Dead | - | [Not Available] | ESCA |
| TCGA-IG-A5B8-01A | MALE | WHITE | Stage IB | Dead | - | [Not Available] | ESCA |
| TCGA-VR-A8Q7-01A | MALE | WHITE | Stage IIIA | Alive | - | 1117 | ESCA |
| TCGA-Q9-A6FW-01A | MALE | WHITE | Stage IIIB | Alive | - | 115 | ESCA |
| TCGA-JY-A6FB-01A | MALE | WHITE | Stage I | Alive | - | 1837 | ESCA |
| TCGA-IC-A6RE-01A | MALE | WHITE | Stage IIB | Alive | - | 234 | ESCA |
| TCGA-RE-A7BO-01A | FEMALE | WHITE | Stage IIB | Dead | - | [Not Available] | ESCA |
| TCGA-LN-A7HY-01A | MALE | ASIAN | Stage III | Alive | - | 0 | ESCA |
| TCGA-L5-A8NE-01A | MALE | WHITE | Stage IIB | Alive | - | 1688 | ESCA |
| TCGA-L7-A56G-01A | MALE | BLACK OR AFRICAN AMERICAN | [Not Available] | Alive | - | 245 | ESCA |
| TCGA-VR-AA7I-01A | MALE | WHITE | Stage III | Dead | - | [Not Available] | ESCA |
| TCGA-S8-A6BW-01A | MALE | WHITE | Stage IB | Alive | - | 426 | ESCA |
| TCGA-LN-A4MQ-01A | MALE | ASIAN | Stage III | Alive | - | 3 | ESCA |
| TCGA-L5-A8NQ-01A | MALE | WHITE | Stage IIA | Dead | - | [Not Available] | ESCA |
| TCGA-L5-A4OH-01A | MALE | WHITE | Stage I | Alive | - | 593 | ESCA |
| TCGA-LN-A4A3-01A | MALE | ASIAN | Stage III | Alive | - | 2 | ESCA |
| TCGA-LN-A49U-01A | MALE | ASIAN | Stage IIA | Alive | - | 2 | ESCA |
| TCGA-VR-A8EQ-01A | MALE | WHITE | Stage III | Dead | - | [Not Available] | ESCA |
| TCGA-L5-A8NW-01A | MALE | WHITE | [Discrepancy] | Dead | - | [Not Available] | ESCA |
| TCGA-VR-A8ET-01A | MALE | WHITE | Stage IIA | Dead | - | [Not Available] | ESCA |
| TCGA-IG-A4QS-01A | MALE | WHITE | Stage IIIB | Alive | - | 8 | ESCA |
| TCGA-LN-A7HZ-01A | MALE | ASIAN | Stage IIA | Alive | - | 0 | ESCA |
| TCGA-IG-A50L-01A | MALE | ASIAN | Stage IIIA | Alive | - | 16 | ESCA |
| TCGA-L5-A43J-01A | MALE | WHITE | Stage IIB | Dead | - | [Not Available] | ESCA |
| TCGA-L5-A8NT-01A | MALE | WHITE | Stage IIB | Alive | - | 825 | ESCA |
| TCGA-LN-A49X-01A | MALE | ASIAN | Stage IIA | Alive | - | 3 | ESCA |
| TCGA-2H-A9GK-01A | MALE | [Unknown] | Stage III | Dead | - | [Not Available] | ESCA |
| TCGA-R6-A6L4-01A | MALE | WHITE | [Not Available] | Alive | - | 447 | ESCA |
| TCGA-VR-AA4D-01A | MALE | WHITE | Stage IIB | Alive | - | 1378 | ESCA |
| TCGA-Z6-A8JE-01A | MALE | WHITE | Stage IIIA | Alive | - | 0 | ESCA |
| TCGA-LN-A4A5-01A | MALE | ASIAN | Stage IIA | Alive | - | 3 | ESCA |
| TCGA-VR-A8EX-01A | MALE | [Unknown] | Stage IVA | Dead | - | [Not Available] | ESCA |
| TCGA-LN-A49M-01A | MALE | ASIAN | Stage IIA | Alive | - | 5 | ESCA |
| TCGA-JY-A93F-01A | FEMALE | WHITE | Stage IB | Alive | - | 535 | ESCA |
| TCGA-V5-A7RB-01A | MALE | [Unknown] | [Unknown] | Dead | - | [Not Available] | ESCA |
| TCGA-JY-A938-01A | MALE | WHITE | Stage IIB | Alive | - | 773 | ESCA |
| TCGA-L5-A8NV-01A | MALE | WHITE | Stage IIA | Dead | - | [Not Available] | ESCA |
| TCGA-L5-A4OX-01A | MALE | WHITE | Stage IIB | Dead | - | [Not Available] | ESCA |
| TCGA-L5-A8NR-01A | FEMALE | [Not Evaluated] | Stage III | Alive | - | 265 | ESCA |
| TCGA-2H-A9GO-01A | MALE | [Unknown] | Stage IVA | Dead | - | [Not Available] | ESCA |
| TCGA-IG-A625-01A | MALE | ASIAN | Stage IIIB | Alive | - | 11 | ESCA |
| TCGA-LN-A8HZ-01A | MALE | ASIAN | Stage IIA | Alive | - | 0 | ESCA |
| TCGA-L5-A4OT-01A | MALE | WHITE | Stage IV | Dead | - | [Not Available] | ESCA |
| TCGA-L5-A4OJ-01A | FEMALE | WHITE | Stage I | Alive | - | 195 | ESCA |
| TCGA-JY-A6FE-01A | MALE | WHITE | Stage III | Dead | - | [Not Available] | ESCA |
| TCGA-LN-A8I1-01A | FEMALE | ASIAN | Stage IIA | Alive | - | 0 | ESCA |
| TCGA-LN-A5U7-01A | MALE | ASIAN | Stage IIA | Alive | - | 36 | ESCA |
| TCGA-IG-A8O2-01A | MALE | ASIAN | Stage IIIB | Alive | - | 14 | ESCA |
| TCGA-L5-A4ON-01A | MALE | WHITE | Stage IIB | Dead | - | [Not Available] | ESCA |
| TCGA-2H-A9GR-01A | MALE | [Unknown] | Stage IIA | Dead | - | [Not Available] | ESCA |
| TCGA-IG-A4P3-01A | MALE | WHITE | Stage IIB | Alive | - | 1 | ESCA |
| TCGA-R6-A8W8-01B | MALE | WHITE | [Not Available] | Dead | - | [Not Available] | ESCA |
| TCGA-IG-A3I8-01A | FEMALE | WHITE | Stage IIA | Alive | - | 0 | ESCA |
| TCGA-IG-A3QL-01A | MALE | WHITE | Stage IIA | Alive | - | 0 | ESCA |
| TCGA-JY-A93D-01A | MALE | WHITE | Stage IIIC | Alive | - | 769 | ESCA |
| TCGA-L5-A8NH-01A | MALE | WHITE | Stage IV | Dead | - | [Not Available] | ESCA |
| TCGA-LN-A49O-01A | MALE | ASIAN | Stage IIA | Alive | - | 10 | ESCA |
| TCGA-LN-A4A1-01A | MALE | ASIAN | Stage IIA | Alive | - | 0 | ESCA |
| TCGA-VR-A8EY-01A | FEMALE | WHITE | Stage IIA | Alive | - | 724 | ESCA |
| TCGA-L5-A4OO-01A | MALE | WHITE | Stage IIIC | Alive | - | 101 | ESCA |
| TCGA-LN-A4A8-01A | MALE | ASIAN | Stage IIA | Alive | - | 2 | ESCA |
| TCGA-L5-A8NS-01A | MALE | WHITE | Stage IIB | Alive | - | 408 | ESCA |
| TCGA-L5-A4OI-01A | MALE | WHITE | Stage IIIC | Alive | - | 267 | ESCA |
| TCGA-VR-A8EU-01A | MALE | WHITE | Stage IV | Dead | - | [Not Available] | ESCA |
| TCGA-LN-A4A9-01A | MALE | ASIAN | Stage IIA | Alive | - | 2 | ESCA |
| TCGA-R6-A6Y0-01B | MALE | WHITE | [Not Available] | Alive | - | 1641 | ESCA |
| TCGA-L5-A4OS-01A | FEMALE | WHITE | Stage IIB | Alive | - | 935 | ESCA |
| TCGA-L5-A891-01A | MALE | WHITE | [Unknown] | Alive | - | 114 | ESCA |
| TCGA-L5-A88T-01A | MALE | WHITE | Stage IIB | Alive | - | 265 | ESCA |
| TCGA-M9-A5M8-01A | MALE | [Not Evaluated] | Stage IIA | Alive | - | 536 | ESCA |
| TCGA-L5-A8NL-01A | MALE | WHITE | Stage III | Alive | - | 402 | ESCA |
| Sample | Gender | Race | Stage | Status | Age | Days to follow up | Tumor ID |