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  • Changelog
    v0.1 cell line networks
    v0.2 aggregate tissue networks
    v0.3 TF enrichement tool
    v0.4 single-sample tissue networks
    v0.5 CLUEreg tool
    v0.6 colon cancer networks
    v0.7 drug networks
    v0.7.1 API v1
    v0.8 liver, cervix, and breast cancer networks
    v0.9 miRNA tissue networks
    v0.9.1 bootstrap 5
    v1.0 glioblastoma networks
    v1.0.1 drug combinations
    v1.1 Cell line networks
    v1.2 User upload network
    v1.2.1 Gene targeting table
    v1.2.2 DRAGON miRNA network
    v1.3 Network comparison
    v1.3.1 Guided tours
    v1.4.0 CCLE multi-omic map
    v1.5.0 EGRET networks

    LAML cancer networks

    Data sets 1 Networks Aggregate 1

    Hover over the bar plot to get the GO term. Differentially targeted genes and TFs were computed by comparing a cancer network to all other cancers.

    Tool description

    PANDA reconstructs a gene regulatory network using TF PPI, TF DNA binding motif, and gene expression samples. You can check the phenotypic information for the clinical variables of the samples that were used to reconstruct the network.

    Publication
    Please check the reference at the following link.
    # Tissue Tool netZoo release Network
    PPI
    Motif Expression TFs Genes Data Samples Precision
    Reference
    1 Acute Myeloid Leukemia PANDA netZooR 0.9
    AdjCodeVis
    644 29375 TCGA 151 D

    Variable description

    This is a description of the primary clinical variables of the gene expression samples that were used to generate the gene regulatory network.

    Sample
    Gender Race Stage
    Vital status Age
    Days to last follow up Tumor ID
    TCGA-AB-2876-03A FEMALE WHITE - Alive - 1219 LAML
    TCGA-AB-2952-03B FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2915-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2929-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2938-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2849-03A MALE WHITE - Alive - 2220 LAML
    TCGA-AB-2877-03A FEMALE WHITE - Alive - 638 LAML
    TCGA-AB-2986-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2971-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2955-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-3007-03A MALE WHITE - Alive - 1581 LAML
    TCGA-AB-2896-03B FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2821-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2841-03B FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2899-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-3001-03A FEMALE WHITE - Alive - 1581 LAML
    TCGA-AB-2924-03A MALE WHITE - Alive - 90 LAML
    TCGA-AB-2941-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2892-03A FEMALE WHITE - Alive - 943 LAML
    TCGA-AB-2812-03A FEMALE BLACK OR AFRICAN AMERICAN - Dead - [Not Available] LAML
    TCGA-AB-2869-03A FEMALE BLACK OR AFRICAN AMERICAN - Alive - 243 LAML
    TCGA-AB-2806-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2863-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2982-03B FEMALE [Not Available] - Alive - 150 LAML
    TCGA-AB-2883-03A MALE WHITE - Alive - 730 LAML
    TCGA-AB-2851-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2980-03A MALE WHITE - Alive - 699 LAML
    TCGA-AB-2805-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2819-03A FEMALE WHITE - Alive - 2496 LAML
    TCGA-AB-3008-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2846-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2880-03A MALE WHITE - Dead - 424 LAML
    TCGA-AB-2925-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2933-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2984-03A MALE WHITE - Alive - 1157 LAML
    TCGA-AB-2966-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2934-03A MALE WHITE - Alive - 28 LAML
    TCGA-AB-2970-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2878-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2976-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2843-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2917-03A FEMALE WHITE - Alive - 1216 LAML
    TCGA-AB-2900-03A MALE BLACK OR AFRICAN AMERICAN - Dead - [Not Available] LAML
    TCGA-AB-2874-03A MALE WHITE - Alive - 396 LAML
    TCGA-AB-2995-03A MALE WHITE - Alive - 1551 LAML
    TCGA-AB-2895-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2872-03A MALE BLACK OR AFRICAN AMERICAN - Alive - 638 LAML
    TCGA-AB-2935-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2931-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2919-03A FEMALE WHITE - Alive - 61 LAML
    TCGA-AB-2886-03A MALE WHITE - Alive - 181 LAML
    TCGA-AB-2937-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2894-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2996-03A MALE WHITE - Alive - 1581 LAML
    TCGA-AB-2987-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2991-03A FEMALE WHITE - Alive - 1826 LAML
    TCGA-AB-2859-03A MALE BLACK OR AFRICAN AMERICAN - Dead - [Not Available] LAML
    TCGA-AB-2811-03B MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2865-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2977-03B FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2845-03B FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2866-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2949-03B MALE WHITE - Alive - 699 LAML
    TCGA-AB-2853-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2858-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2893-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2943-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2839-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2973-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2836-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2826-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2916-03A FEMALE WHITE - Alive - 882 LAML
    TCGA-AB-2891-03A MALE BLACK OR AFRICAN AMERICAN - Dead - [Not Available] LAML
    TCGA-AB-2808-03A MALE WHITE - Alive - 2861 LAML
    TCGA-AB-2814-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2823-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2815-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2885-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2918-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2813-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2847-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2871-03A MALE BLACK OR AFRICAN AMERICAN - Alive - 153 LAML
    TCGA-AB-2981-03B FEMALE WHITE - Alive - 487 LAML
    TCGA-AB-3009-03A MALE [Not Available] - Dead - [Not Available] LAML
    TCGA-AB-2913-03A MALE WHITE - Alive - 1216 LAML
    TCGA-AB-2884-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2830-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2881-03A FEMALE WHITE - Alive - 393 LAML
    TCGA-AB-2857-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2908-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2946-03A MALE WHITE - Alive - [Not Available] LAML
    TCGA-AB-2835-03A MALE WHITE - Alive - 1673 LAML
    TCGA-AB-2963-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2834-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2948-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2930-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2890-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2898-03A FEMALE WHITE - Alive - 393 LAML
    TCGA-AB-2940-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2994-03A MALE WHITE - Alive - 1798 LAML
    TCGA-AB-2956-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2944-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2983-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2988-03B FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2921-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2861-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-3012-03A MALE WHITE - Alive - 1887 LAML
    TCGA-AB-2882-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2889-03A MALE WHITE - Alive - 304 LAML
    TCGA-AB-2975-03A MALE BLACK OR AFRICAN AMERICAN - Dead - [Not Available] LAML
    TCGA-AB-2870-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2936-03A FEMALE WHITE - Alive - 59 LAML
    TCGA-AB-2950-03A FEMALE WHITE - Alive - 306 LAML
    TCGA-AB-2999-03B MALE WHITE - Alive - 1735 LAML
    TCGA-AB-2959-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2822-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2932-03A MALE WHITE - Alive - 0 LAML
    TCGA-AB-2910-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2817-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2912-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2901-03A MALE BLACK OR AFRICAN AMERICAN - Alive - 59 LAML
    TCGA-AB-2867-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2875-03A MALE WHITE - Alive - 212 LAML
    TCGA-AB-2998-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2820-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2888-03B MALE WHITE - Alive - 334 LAML
    TCGA-AB-3002-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2842-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2911-03A FEMALE BLACK OR AFRICAN AMERICAN - Alive - 1186 LAML
    TCGA-AB-2810-03A FEMALE BLACK OR AFRICAN AMERICAN - Dead - [Not Available] LAML
    TCGA-AB-2992-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-3011-03A FEMALE WHITE - Alive - 1885 LAML
    TCGA-AB-2914-03A FEMALE WHITE - Alive - 792 LAML
    TCGA-AB-2828-03A MALE WHITE - Alive - 2284 LAML
    TCGA-AB-2965-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2942-03A FEMALE WHITE - Alive - 641 LAML
    TCGA-AB-2856-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2818-03A FEMALE ASIAN - Dead - [Not Available] LAML
    TCGA-AB-3000-03A MALE WHITE - Alive - 1249 LAML
    TCGA-AB-2840-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2844-03A MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2979-03B FEMALE WHITE - Alive - 671 LAML
    TCGA-AB-2928-03A FEMALE BLACK OR AFRICAN AMERICAN - Dead - 59 LAML
    TCGA-AB-2825-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2873-03A FEMALE WHITE - Alive - 273 LAML
    TCGA-AB-2920-03B MALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2862-03A FEMALE BLACK OR AFRICAN AMERICAN - Alive - 1430 LAML
    TCGA-AB-2939-03A MALE WHITE - Alive - 455 LAML
    TCGA-AB-2927-03A FEMALE WHITE - Dead - [Not Available] LAML
    TCGA-AB-2897-03A FEMALE WHITE - Alive - 243 LAML
    TCGA-AB-2990-03B MALE WHITE - Alive - 457 LAML
    Sample Gender Race Stage Status Age Days to follow up Tumor ID
    Contact

    Department of Biostatistics
    Harvard T.H. Chan School of Public Health

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