Home
  • Networks
    • Small molecules
    • Cancer
    • Tissues
    • Cell lines
  • Analysis
    • Drug repurposing (CLUEreg)
    • Enrichment analysis
    • Upload your network
    • Network comparison
    • CCLE map
    • Help
    • GitHub
    • API
    • Changelog
    • Download
    • Contact
    • Changelog
    v0.1 cell line networks
    v0.2 aggregate tissue networks
    v0.3 TF enrichement tool
    v0.4 single-sample tissue networks
    v0.5 CLUEreg tool
    v0.6 colon cancer networks
    v0.7 drug networks
    v0.7.1 API v1
    v0.8 liver, cervix, and breast cancer networks
    v0.9 miRNA tissue networks
    v0.9.1 bootstrap 5
    v1.0 glioblastoma networks
    v1.0.1 drug combinations
    v1.1 Cell line networks
    v1.2 User upload network
    v1.2.1 Gene targeting table
    v1.2.2 DRAGON miRNA network
    v1.3 Network comparison
    v1.3.1 Guided tours
    v1.4.0 CCLE multi-omic map
    v1.5.0 EGRET networks

    LIHC cancer networks

    Data sets 1 Networks Aggregate 1

    To get the full list of phenotypic variables, please check the menu below.

    Tool description

    Like PANDA, OTTER reconstructs a gene regulatory network from the TF PPI, TF DNA binding motif, and gene expression samples. OTTER formulates network inference as a well-defined objective function that optimizes the graph matching of the three network priors. Check the phenotypic information for the clinical variables of the samples that were used to reconstruct the network.

    Publication
    Please check the reference Weighill et al. (2020) at the following link.
    # Tissue Tool netZoo release Network
    		 PPI
    		 Motif Expression TFs Genes Data Samples Precision
    		 Reference
    1 Liver cancer OTTER netZooM 0.5.1
    AdjCodeVis
    		 1637 27386 TCGA 374 D

    Variable description

    This is a description of the primary clinical variables of the gene expression samples that were used to generate the gene regulatory network.

    Sample
    		 Gender Race Ethnicity Weight
    		 Height
    		 Anatomic location
    		 Stage
    		 Diagnosis Vital status Time
    		 Age
    TCGA-DD-AAVP-01A-11R-A41C-07 male asian not hispanic or latino 62 167 Liver stage i c22.0 alive NA 48
    TCGA-DD-A4NP-01A-11R-A28V-07 male white not hispanic or latino 79 177 Liver stage i c22.0 alive NA 32
    TCGA-BC-4073-01B-02R-A131-07 male white not hispanic or latino NA NA Liver stage iiia c22.0 alive NA 73
    TCGA-MI-A75E-01A-11R-A32O-07 male white not hispanic or latino 103 175 Liver stage iiic c22.0 alive NA 61
    TCGA-G3-A7M8-01A-11R-A33R-07 male asian not hispanic or latino NA NA Liver stage i c22.0 alive NA 31
    TCGA-DD-A11C-01A-11R-A131-07 male white not hispanic or latino 123 186 Liver stage i c22.0 alive NA 69
    TCGA-CC-A9FW-01A-11R-A37K-07 male asian not hispanic or latino 67 175 Liver stage iiia c22.0 alive NA 68
    TCGA-CC-A3MC-01A-11R-A22L-07 male asian not hispanic or latino 52 163 Liver stage iiia c22.0 alive NA 54
    TCGA-DD-A114-01A-11R-A131-07 male black or african american not hispanic or latino 74 173 Liver stage ii c22.0 dead 1149 42
    TCGA-WX-AA46-01A-11R-A39D-07 male white not hispanic or latino 75 156 Liver stage ii c22.0 alive NA 61
    TCGA-DD-AAW2-01A-11R-A41C-07 male asian not hispanic or latino 50 156 Liver stage i c22.0 alive NA 69
    TCGA-DD-AAD2-01A-11R-A41C-07 male asian not hispanic or latino 52 156 Liver stage i c22.0 alive NA 66
    TCGA-5C-A9VG-01A-11R-A37K-07 male white not hispanic or latino 73 170 Liver stage ii c22.0 alive NA 58
    TCGA-BC-A3KF-01A-11R-A213-07 female white not reported 58 173 Liver stage i c22.0 alive NA 66
    TCGA-G3-A25X-01A-11R-A16W-07 male asian not hispanic or latino 65 165 Liver stage ii c22.0 alive NA 73
    TCGA-RG-A7D4-01A-12R-A33R-07 male black or african american not hispanic or latino 87 172 Liver stage ii c22.0 alive NA 69
    TCGA-G3-AAV4-01A-11R-A38B-07 female white not hispanic or latino 56 156 Liver stage i c22.0 dead 27 83
    TCGA-DD-AAD0-01A-11R-A41C-07 female asian not hispanic or latino 54 150 Liver stage i c22.0 alive NA 73
    TCGA-DD-AACN-01A-11R-A41C-07 male asian not hispanic or latino 70 171 Liver stage i c22.0 alive NA 32
    TCGA-BC-A10R-01A-11R-A131-07 female white not hispanic or latino NA NA Liver not reported c22.0 dead 308 66
    TCGA-DD-A39X-01A-11R-A213-07 female white not hispanic or latino 48 152 Liver stage i c22.0 dead 1694 78
    TCGA-DD-AAD3-01A-11R-A41C-07 male asian not hispanic or latino 77 178 Liver stage i c22.0 alive NA 43
    TCGA-2Y-A9GZ-01A-11R-A39D-07 female white not hispanic or latino 51 153 Liver stage ii c22.0 dead 848 82
    TCGA-DD-A11D-01A-11R-A131-07 female white not hispanic or latino 73 163 Liver stage i c22.0 dead 1560 57
    TCGA-DD-AACQ-01A-11R-A41C-07 male asian not hispanic or latino 64 169 Liver stage ii c22.0 dead 432 50
    TCGA-DD-A1ED-01A-11R-A155-07 male white not hispanic or latino 85 168 Liver stage i c22.0 alive NA 68
    TCGA-UB-A7MA-01A-11R-A33R-07 female white not hispanic or latino 85 165 Liver stage ii c22.0 alive NA 62
    TCGA-DD-A4NF-01A-11R-A27V-07 male white not hispanic or latino 86 173 Liver stage i c22.0 alive NA 72
    TCGA-DD-AAW0-01A-11R-A41C-07 male asian not hispanic or latino 75 172 Liver stage i c22.0 alive NA 54
    TCGA-G3-A7M9-01A-23R-A352-07 male white not hispanic or latino 73 170 Liver stage iiib c22.0 dead 56 70
    TCGA-DD-AAVW-01A-11R-A41C-07 male asian not hispanic or latino 62 162 Liver stage i c22.0 alive NA 35
    TCGA-DD-AAVZ-01A-11R-A41C-07 male asian not hispanic or latino 62 171 Liver stage i c22.0 alive NA 38
    TCGA-BD-A2L6-01A-11R-A213-07 male white not reported 110 168 Liver not reported c22.0 alive NA 69
    TCGA-G3-A5SI-01A-31R-A27V-07 male asian not hispanic or latino 74 177 Liver stage ii c22.0 dead 768 44
    TCGA-DD-AAVU-01A-11R-A41C-07 male asian not hispanic or latino 88 160 Liver stage ii c22.0 alive NA 46
    TCGA-G3-AAV2-01A-11R-A37K-07 male white not hispanic or latino NA NA Liver stage i c22.0 alive NA 50
    TCGA-FV-A3R2-01A-11R-A22L-07 male white not hispanic or latino 75 NA Liver stage i c22.0 dead 194 75
    TCGA-2Y-A9H7-01A-11R-A39D-07 female white not hispanic or latino 104 157 Liver stage i c22.0 alive NA 81
    TCGA-EP-A2KB-01A-11R-A180-07 female white not hispanic or latino 81 165 Liver stage i c22.0 dead 596 46
    TCGA-CC-A8HU-01A-11R-A36F-07 female asian not hispanic or latino 42 163 Liver stage iiia c22.0 dead 344 39
    TCGA-DD-A4NB-01A-12R-A266-07 male white not hispanic or latino 69 185 Liver stage i c22.0 alive NA 25
    TCGA-PD-A5DF-01A-11R-A27V-07 female white not hispanic or latino 72 167 Liver stage iiib c22.0 dead 639 58
    TCGA-CC-5261-01A-01R-A131-07 male asian not hispanic or latino 58 175 Liver stage ii c22.0 dead 97 44
    TCGA-DD-A11B-01A-11R-A131-07 male white not hispanic or latino 134 181 Liver stage i c22.0 dead 14 73
    TCGA-GJ-A6C0-01A-12R-A311-07 female white not hispanic or latino 90 160 Liver stage ii c22.0 dead 31 75
    TCGA-CC-5262-01A-01R-A131-07 male asian not hispanic or latino 62 170 Liver stage iiic c22.0 dead 103 67
    TCGA-DD-AADW-01A-11R-A39D-07 male asian not hispanic or latino 49 163 Liver stage i c22.0 alive NA 48
    TCGA-DD-A1EF-01A-11R-A131-07 female white not hispanic or latino 81 164 Liver stage i c22.0 dead 394 57
    TCGA-XR-A8TG-01A-11R-A36F-07 male white hispanic or latino 71 184 Liver stage i c22.0 alive NA NA
    TCGA-DD-AADJ-01A-11R-A41C-07 female asian not hispanic or latino 59 154 Liver stage i c22.0 alive NA 70
    TCGA-XR-A8TF-01A-11R-A36F-07 male white hispanic or latino 57 166 Liver stage i c22.0 dead 693 74
    TCGA-K7-AAU7-01A-11R-A38B-07 male white not hispanic or latino NA NA Liver stage ii c22.0 alive NA 61
    TCGA-DD-AAD1-01A-11R-A41C-07 female asian not hispanic or latino 44 161 Liver stage i c22.0 alive NA 51
    TCGA-ED-A7XO-01A-11R-A352-07 male asian not hispanic or latino 64 175 Liver stage iiia c22.0 alive NA 29
    TCGA-DD-AACH-01A-11R-A41C-07 male asian not hispanic or latino 53 160 Liver stage ii c22.0 dead 195 69
    TCGA-ZP-A9CZ-01A-11R-A38B-07 male asian not hispanic or latino 73 167 Liver not reported c22.0 alive NA 72
    TCGA-CC-A7IE-01A-21R-A38B-07 male asian not hispanic or latino 62 172 Liver stage iiia c22.0 dead 217 57
    TCGA-MI-A75G-01A-11R-A32O-07 male white not hispanic or latino 69 178 Liver stage ii c22.0 alive NA 63
    TCGA-BC-A10U-01A-11R-A131-07 male white not hispanic or latino NA NA Liver not reported c22.0 dead 837 69
    TCGA-G3-A25Y-01A-11R-A16W-07 female asian not hispanic or latino 57 158 Liver stage i c22.0 dead 452 52
    TCGA-CC-A5UE-01A-11R-A28V-07 male asian not hispanic or latino 65 175 Liver stage iiib c22.0 dead 272 48
    TCGA-DD-A73D-01A-12R-A32O-07 female white not hispanic or latino 102 170 Liver stage ii c22.0 alive NA 68
    TCGA-G3-A5SK-01A-11R-A27V-07 male white not hispanic or latino 67 169 Liver stage i c22.0 alive NA 58
    TCGA-DD-AAD8-01A-11R-A41C-07 female asian not hispanic or latino 57 152 Liver stage i c22.0 alive NA 73
    TCGA-MR-A520-01A-11R-A266-07 male white not hispanic or latino 104 179 Liver stage i c22.0 alive NA 58
    TCGA-G3-A7M6-01A-11R-A33R-07 female white not hispanic or latino 77 158 Liver stage i c22.0 alive NA 60
    TCGA-RC-A7SB-01A-21R-A352-07 male asian not hispanic or latino 61 166 Liver stage ii c22.0 alive NA 53
    TCGA-DD-A1EL-01A-11R-A155-07 male black or african american not hispanic or latino 54 182 Liver stage ii c22.0 dead 415 23
    TCGA-5R-AA1C-01A-11R-A41C-07 male white not hispanic or latino 90 174 Liver stage ii c22.0 alive NA 57
    TCGA-ED-A8O5-01A-11R-A36F-07 female asian not hispanic or latino 63 165 Liver stage iiia c22.0 alive NA 59
    TCGA-2V-A95S-01A-11R-A37K-07 male asian not hispanic or latino 78 173 Liver stage ii c22.0 alive NA NA
    TCGA-CC-A3MB-01A-11R-A213-07 male asian not hispanic or latino 58 176 Liver stage iiia c22.0 dead 315 36
    TCGA-G3-A5SJ-01A-11R-A27V-07 male white not hispanic or latino 87 171 Liver stage i c22.0 alive NA 59
    TCGA-HP-A5MZ-01A-21R-A27V-07 male not reported not reported 82 185 Liver stage i c22.0 dead 91 78
    TCGA-RC-A6M4-01A-11R-A32O-07 female white not hispanic or latino 87 NA Liver stage iiia c22.0 alive NA NA
    TCGA-G3-A25Z-01A-11R-A16W-07 male asian not hispanic or latino 69 173 Liver stage i c22.0 alive NA 58
    TCGA-K7-A5RF-01A-11R-A28V-07 male white not hispanic or latino 75 177 Liver stage i c22.0 alive NA 64
    TCGA-2Y-A9GT-01A-11R-A38B-07 male white not hispanic or latino 122 182 Liver stage i c22.0 dead 1624 51
    TCGA-DD-AAW1-01A-11R-A41C-07 male asian not hispanic or latino 60 167 Liver stage iiia c22.0 alive NA 55
    TCGA-RC-A7SH-01A-11R-A38B-07 male asian not hispanic or latino 68 174 Liver stage ii c22.0 alive NA 42
    TCGA-DD-AADN-01A-11R-A41C-07 male asian not hispanic or latino 62 160 Liver stage i c22.0 alive NA 59
    TCGA-ED-A66Y-01A-11R-A311-07 female asian not hispanic or latino 59 160 Liver stage iiia c22.0 dead 296 51
    TCGA-DD-AACO-01A-11R-A41C-07 male asian not hispanic or latino 43 164 Liver stage i c22.0 alive NA 40
    TCGA-DD-AAEI-01A-11R-A41C-07 male asian not hispanic or latino 79 166 Liver stage i c22.0 alive NA 72
    TCGA-ZP-A9CY-01A-11R-A38B-07 female white not hispanic or latino 83 152 Liver not reported c22.0 alive NA 66
    TCGA-2Y-A9H8-01A-11R-A39D-07 female white not hispanic or latino 40 150 Liver not reported c22.0 dead 633 85
    TCGA-DD-A3A2-01A-11R-A213-07 female white not hispanic or latino 85 178 Liver stage i c22.0 dead 2131 76
    TCGA-CC-A5UD-01A-11R-A28V-07 male asian not hispanic or latino 62 170 Liver stage iiia c22.0 dead 304 45
    TCGA-ZP-A9D0-01A-11R-A37K-07 female black or african american not hispanic or latino 78 165 Liver not reported c22.0 alive NA 67
    TCGA-BC-A10W-01A-11R-A131-07 male asian not hispanic or latino 71 NA Liver not reported c22.0 dead 91 50
    TCGA-WX-AA47-01A-11R-A39D-07 female white not hispanic or latino 63 168 Liver stage iiia c22.0 dead 556 33
    TCGA-G3-A3CK-01A-11R-A213-07 male asian not hispanic or latino 67 170 Liver stage i c22.0 alive NA 61
    TCGA-G3-A3CH-01A-11R-A22L-07 male asian not hispanic or latino 74 178 Liver stage iiia c22.0 alive NA 53
    TCGA-DD-A1EI-01A-11R-A131-07 male asian not hispanic or latino 69 175 Liver stage i c22.0 alive NA 46
    TCGA-DD-AAE1-01A-11R-A41C-07 male asian not hispanic or latino 62 169 Liver stage i c22.0 alive NA 52
    TCGA-DD-AAEE-01A-11R-A41C-07 male asian not hispanic or latino 58 160 Liver stage i c22.0 alive NA 55
    TCGA-DD-AAE3-01A-11R-A41C-07 male asian not hispanic or latino 73 165 Liver stage i c22.0 alive NA 50
    TCGA-G3-A7M7-01A-12R-A352-07 male white not hispanic or latino 77 181 Liver stage i c22.0 alive NA 65
    TCGA-DD-AACL-01A-11R-A41C-07 female asian not hispanic or latino 69 150 Liver stage i c22.0 dead 107 66
    TCGA-BC-A10X-01A-11R-A131-07 female white not hispanic or latino 65 NA Liver stage iiia c22.0 dead 770 52
    TCGA-FV-A3R3-01A-11R-A22L-07 female white not hispanic or latino 97 161 Liver stage i c22.0 dead 366 38
    TCGA-2Y-A9GW-01A-11R-A38B-07 male white not hispanic or latino 139 182 Liver stage i c22.0 dead 1271 64
    TCGA-DD-AACT-01A-11R-A41C-07 female asian not hispanic or latino 62 158 Liver stage i c22.0 alive NA 69
    TCGA-ZS-A9CG-01A-11R-A37K-07 male white not hispanic or latino 94 179 Liver stage ii c22.0 alive NA 55
    TCGA-DD-A4NH-01A-11R-A27V-07 female white not hispanic or latino 81 157 Liver stage iiib c22.0 alive NA 65
    TCGA-DD-AADK-01A-11R-A41C-07 female asian not hispanic or latino 51 150 Liver stage ii c22.0 alive NA 68
    TCGA-DD-AADC-01A-11R-A41C-07 male asian not hispanic or latino 81 176 Liver stage i c22.0 dead 425 53
    TCGA-DD-AAD6-01A-11R-A41C-07 male asian not hispanic or latino 93 167 Liver stage iiia c22.0 alive NA 66
    TCGA-DD-AACD-01A-11R-A41C-07 male asian not hispanic or latino 66 182 Liver stage i c22.0 dead 381 48
    TCGA-NI-A8LF-01A-11R-A36F-07 male white not hispanic or latino 104 171 Liver stage i c22.0 alive NA 74
    TCGA-ZP-A9D4-01A-11R-A37K-07 female white not hispanic or latino 55 155 Liver not reported c22.0 alive NA 64
    TCGA-DD-AAE7-01A-11R-A41C-07 male asian not hispanic or latino 74 172 Liver stage i c22.0 alive NA 72
    TCGA-DD-A39Z-01A-11R-A213-07 female not reported not reported 61 165 Liver stage ii c22.0 dead 601 43
    TCGA-DD-AACX-01A-11R-A41C-07 male asian not hispanic or latino 53 155 Liver stage ii c22.0 alive NA 66
    TCGA-EP-A2KA-01A-11R-A180-07 female white not hispanic or latino NA 178 Liver stage iiia c22.0 dead 627 52
    TCGA-ZP-A9D1-01A-11R-A38B-07 female white not hispanic or latino 130 170 Liver not reported c22.0 alive NA 56
    TCGA-DD-A3A9-01A-11R-A266-07 female white not hispanic or latino 62 168 Liver stage ivb c22.0 dead 931 64
    TCGA-DD-A115-01A-11R-A131-07 male white not reported 79 168 Liver stage iiia c22.0 dead 2542 53
    TCGA-GJ-A9DB-01A-11R-A37K-07 male white not hispanic or latino 96 187 Liver stage i c22.0 dead 67 68
    TCGA-DD-AADS-01A-11R-A41C-07 male asian not hispanic or latino 53 164 Liver stage i c22.0 alive NA 63
    TCGA-ED-A7PX-01A-51R-A352-07 female asian not hispanic or latino 43 161 Liver stage ii c22.0 alive NA 48
    TCGA-DD-A73G-01A-22R-A32O-07 female white not hispanic or latino 44 155 Liver stage i c22.0 alive NA 73
    TCGA-5R-AAAM-01A-12R-A41C-07 female white not hispanic or latino 80 163 Liver stage ii c22.0 dead 46 65
    TCGA-DD-AADQ-01A-11R-A41C-07 male asian not hispanic or latino 64 165 Liver stage ii c22.0 alive NA 59
    TCGA-DD-A39W-01A-11R-A213-07 female white not hispanic or latino 74 177 Liver stage iii c22.0 dead 827 29
    TCGA-WQ-A9G7-01A-11R-A37K-07 female white not hispanic or latino 69 157 Liver not reported c22.0 alive NA 71
    TCGA-2Y-A9H0-01A-11R-A38B-07 male white hispanic or latino 89 180 Liver stage iiia c22.0 alive NA 49
    TCGA-DD-AAC8-01A-11R-A41C-07 male asian not hispanic or latino 57 156 Liver stage i c22.0 dead 16 72
    TCGA-KR-A7K8-01A-11R-A33J-07 male not reported not reported 109 170 Liver stage i c22.0 alive NA 57
    TCGA-BC-A216-01A-11R-A155-07 female white not reported 151 164 Liver stage iiia c22.0 alive NA 62
    TCGA-DD-AADV-01A-11R-A39D-07 male asian not hispanic or latino 64 176 Liver stage i c22.0 alive NA 50
    TCGA-DD-AAE9-01A-11R-A41C-07 male asian not hispanic or latino 63 165 Liver stage i c22.0 alive NA 69
    TCGA-XR-A8TC-01A-11R-A36F-07 female white hispanic or latino 52 155 Liver stage i c22.0 alive NA NA
    TCGA-G3-AAV5-01A-11R-A37K-07 male white not hispanic or latino 88 165 Liver stage ii c22.0 alive NA 67
    TCGA-K7-A5RG-01A-11R-A28V-07 male black or african american not hispanic or latino 123 173 Liver stage i c22.0 alive NA 66
    TCGA-DD-A3A3-01A-11R-A22L-07 male asian not hispanic or latino 71 167 Liver stage i c22.0 dead 535 45
    TCGA-2Y-A9H5-01A-11R-A38B-07 female white not hispanic or latino 69 157 Liver stage i c22.0 dead 555 59
    TCGA-DD-A4NI-01A-11R-A27V-07 male white not hispanic or latino 99 172 Liver stage ii c22.0 alive NA 67
    TCGA-DD-A1EC-01A-21R-A131-07 female white not hispanic or latino 50 157 Liver stage i c22.0 alive NA 20
    TCGA-DD-A1EJ-01A-11R-A155-07 female white not hispanic or latino 64 154 Liver stage iiic c22.0 dead 1005 71
    TCGA-DD-AAED-01A-12R-A41C-07 male asian not hispanic or latino 69 166 Liver stage i c22.0 alive NA 51
    TCGA-DD-A4NR-01A-11R-A311-07 female white not hispanic or latino 54 64 Liver stage i c22.0 dead 9 85
    TCGA-CC-A7IG-01A-11R-A33J-07 male asian not hispanic or latino 62 174 Liver stage ii c22.0 dead 299 47
    TCGA-WX-AA44-01A-11R-A39D-07 female white hispanic or latino 61 152 Liver stage i c22.0 alive NA 64
    TCGA-DD-A73B-01A-12R-A32O-07 female white hispanic or latino 74 154 Liver stage i c22.0 dead 283 72
    TCGA-MI-A75I-01A-11R-A32O-07 male black or african american not hispanic or latino 100 188 Liver not reported c22.0 alive NA 61
    TCGA-ED-A459-01A-11R-A266-07 male asian not hispanic or latino 51 167 Liver stage ii c22.0 alive NA 47
    TCGA-DD-AAE2-01A-11R-A41C-07 male asian not hispanic or latino 82 174 Liver stage i c22.0 alive NA 51
    TCGA-DD-AAW3-01A-11R-A41C-07 male asian not hispanic or latino 64 162 Liver stage i c22.0 alive NA 69
    TCGA-BW-A5NP-01A-11R-A27V-07 female white hispanic or latino NA NA Liver stage iv c22.0 alive NA 26
    TCGA-DD-AA3A-01A-11R-A37K-07 female white not hispanic or latino 60 151 Liver stage i c22.0 dead 410 81
    TCGA-XR-A8TD-01A-12R-A39D-07 female white hispanic or latino 69 156 Liver stage iiib c22.0 alive NA NA
    TCGA-BC-A10S-01A-22R-A131-07 male white not hispanic or latino 74 NA Liver not reported c22.0 dead 1423 81
    TCGA-T1-A6J8-01A-11R-A32O-07 male white not hispanic or latino 65 188 Liver not reported c22.0 alive NA 68
    TCGA-KR-A7K0-01A-12R-A33R-07 male white not reported 66 174 Liver stage i c22.0 dead 65 65
    TCGA-CC-A8HV-01A-11R-A36F-07 female asian not hispanic or latino 51 159 Liver stage ii c22.0 dead 279 51
    TCGA-DD-A4NK-01A-11R-A28V-07 female white not hispanic or latino 84 NA Liver stage iiia c22.0 dead 1210 80
    TCGA-FV-A4ZP-01A-12R-A266-07 male white not hispanic or latino 69 168 Liver stage iiia c22.0 dead 2486 78
    TCGA-BC-4072-01B-11R-A155-07 female white not hispanic or latino NA NA Liver stage iiia c22.0 dead 1490 74
    TCGA-G3-AAV7-01A-11R-A38B-07 male asian not hispanic or latino 58 165 Liver stage ii c22.0 alive NA 38
    TCGA-CC-A9FU-01A-11R-A37K-07 female asian not hispanic or latino 48 153 Liver stage iiia c22.0 alive NA 52
    TCGA-DD-AAE0-01A-11R-A41C-07 female asian not hispanic or latino 56 159 Liver stage iiia c22.0 alive NA 45
    TCGA-DD-AADB-01A-11R-A41C-07 male asian not hispanic or latino 68 165 Liver stage i c22.0 alive NA 51
    TCGA-DD-A11A-01A-11R-A131-07 male black or african american not hispanic or latino 67 156 Liver stage i c22.0 alive NA 67
    TCGA-5C-A9VH-01A-11R-A37K-07 male white not hispanic or latino 69 165 Liver stage i c22.0 alive NA 70
    TCGA-CC-A3MA-01A-11R-A213-07 male asian not hispanic or latino 66 168 Liver stage iiia c22.0 dead 303 61
    TCGA-DD-A3A7-01A-11R-A22L-07 male not reported not reported 80 188 Liver stage iiib c22.0 dead 419 67
    TCGA-CC-5264-01A-01R-A131-07 male asian not hispanic or latino 52 160 Liver stage iiia c22.0 dead 102 71
    TCGA-DD-AADM-01A-11R-A41C-07 male asian not hispanic or latino 55 159 Liver stage ii c22.0 dead 12 58
    TCGA-DD-AAD5-01A-11R-A41C-07 male asian not hispanic or latino 70 170 Liver stage i c22.0 alive NA 54
    TCGA-DD-AACF-01A-11R-A41C-07 male asian not hispanic or latino 60 168 Liver stage i c22.0 dead 365 68
    TCGA-WJ-A86L-01A-12R-A39D-07 female white not hispanic or latino 56 159 Liver stage i c22.0 alive NA 68
    TCGA-BC-A10Y-01A-11R-A131-07 male white not hispanic or latino 77 175 Liver not reported c22.0 dead 711 76
    TCGA-DD-A1EE-01A-11R-A131-07 male white not hispanic or latino 77 175 Liver stage iiia c22.0 dead 349 73
    TCGA-FV-A4ZQ-01A-11R-A266-07 male white not hispanic or latino NA NA Liver stage i c22.0 alive NA 52
    TCGA-DD-A119-01A-11R-A131-07 male asian not hispanic or latino 58 160 Liver stage iv c22.0 dead 223 40
    TCGA-CC-A1HT-01A-11R-A131-07 male asian not hispanic or latino 54 163 Liver stage iiia c22.0 dead 101 50
    TCGA-DD-AACW-01A-11R-A41C-07 male asian not hispanic or latino 65 166 Liver stage i c22.0 alive NA 43
    TCGA-DD-A1EB-01A-11R-A131-07 female not reported not reported 57 164 Liver stage i c22.0 alive NA 72
    TCGA-DD-A3A8-01A-11R-A22L-07 male white not hispanic or latino 99 177 Liver stage ii c22.0 dead 11 75
    TCGA-CC-5258-01A-01R-A131-07 male asian not hispanic or latino 55 NA Liver stage ii c22.0 dead 129 48
    TCGA-BC-A5W4-01A-11R-A28V-07 male white not hispanic or latino 106 183 Liver stage iiia c22.0 dead 547 69
    TCGA-DD-A1EG-01A-11R-A213-07 male white not hispanic or latino 82 168 Liver stage i c22.0 dead 1372 76
    TCGA-DD-AACB-01A-11R-A41C-07 female asian not hispanic or latino 72 156 Liver stage i c22.0 alive NA 74
    TCGA-BC-A217-01A-11R-A155-07 female white not reported 81 163 Liver stage ii c22.0 dead 1397 75
    TCGA-G3-AAV0-01A-11R-A37K-07 male asian not hispanic or latino 58 158 Liver stage i c22.0 alive NA 58
    TCGA-DD-AAEK-01A-11R-A41C-07 male asian not hispanic or latino 64 169 Liver stage ii c22.0 alive NA 51
    TCGA-BC-A10Z-01A-11R-A131-07 female white not hispanic or latino 79 NA Liver stage i c22.0 dead 34 62
    TCGA-BC-A69I-01A-11R-A311-07 male white not reported 95 180 Liver stage i c22.0 alive NA 69
    TCGA-DD-AADF-01A-11R-A41C-07 female asian not hispanic or latino 55 145 Liver stage i c22.0 dead 115 64
    TCGA-RC-A7SF-01A-11R-A352-07 male asian not hispanic or latino 76 170 Liver stage i c22.0 alive NA 66
    TCGA-EP-A2KC-01A-11R-A213-07 male black or african american not hispanic or latino NA 171 Liver stage i c22.0 dead 19 62
    TCGA-ES-A2HS-01A-11R-A180-07 male white not hispanic or latino 97 180 Liver stage i c22.0 dead 688 80
    TCGA-CC-5259-01A-31R-A213-07 female asian not hispanic or latino 49 153 Liver stage iiic c22.0 alive NA 60
    TCGA-2Y-A9GY-01A-11R-A38B-07 female white not hispanic or latino 92 161 Liver stage ii c22.0 dead 757 64
    TCGA-BC-A3KG-01A-11R-A213-07 female white not hispanic or latino 64 159 Liver stage ii c22.0 alive NA 68
    TCGA-DD-A4NO-01A-11R-A28V-07 male white not hispanic or latino 109 176 Liver stage i c22.0 alive NA 65
    TCGA-O8-A75V-01A-11R-A32O-07 male not reported hispanic or latino 92 180 Liver stage i c22.0 alive NA 54
    TCGA-BC-A69H-01A-11R-A311-07 male white not hispanic or latino 70 173 Liver stage ii c22.0 alive NA 64
    TCGA-DD-A73C-01A-12R-A33J-07 female white not hispanic or latino 49 159 Liver stage iiia c22.0 alive NA 65
    TCGA-5C-AAPD-01A-21R-A39D-07 male asian not hispanic or latino 69 172 Liver stage ii c22.0 alive NA 61
    TCGA-DD-AACP-01A-11R-A41C-07 male asian not hispanic or latino 62 155 Liver stage i c22.0 alive NA 64
    TCGA-KR-A7K7-01A-11R-A33J-07 female white not reported 125 168 Liver stage ii c22.0 alive NA 61
    TCGA-ZS-A9CE-01A-11R-A37K-07 female white not hispanic or latino NA NA Liver stage ii c22.0 alive NA 79
    TCGA-DD-A118-01A-11R-A131-07 female white not hispanic or latino 75 169 Liver stage ii c22.0 alive NA 77
    TCGA-ES-A2HT-01A-12R-A180-07 male black or african american not hispanic or latino 80 174 Liver stage i c22.0 dead 438 54
    TCGA-CC-A5UC-01A-11R-A28V-07 male asian not hispanic or latino 57 165 Liver stage iiia c22.0 dead 347 63
    TCGA-HP-A5N0-01A-11R-A28V-07 female not reported not reported 65 156 Liver not reported c22.0 dead 1147 90
    TCGA-ED-A8O6-01A-11R-A36F-07 female asian not hispanic or latino 45 165 Liver stage iiia c22.0 dead 56 50
    TCGA-ZS-A9CF-01A-11R-A38B-07 male white not hispanic or latino NA NA Liver stage ii c22.0 alive NA 64
    TCGA-ZS-A9CF-02A-11R-A38B-07 male white not hispanic or latino NA NA Liver stage ii c22.0 alive NA 64
    TCGA-2Y-A9H4-01A-11R-A38B-07 male black or african american not hispanic or latino 61 167 Liver stage i c22.0 alive NA 68
    TCGA-DD-A1EA-01A-11R-A131-07 male asian not hispanic or latino 94 168 Liver stage ii c22.0 alive NA 68
    TCGA-DD-AAVQ-01A-11R-A41C-07 male asian not hispanic or latino 72 171 Liver stage i c22.0 alive NA 38
    TCGA-DD-A4NJ-01A-11R-A27V-07 female white not hispanic or latino 88 164 Liver stage ii c22.0 alive NA 54
    TCGA-K7-A6G5-01A-11R-A311-07 male white not hispanic or latino 80 184 Liver stage i c22.0 alive NA 66
    TCGA-DD-AACS-01A-11R-A41C-07 male asian not hispanic or latino 80 172 Liver stage i c22.0 alive NA 39
    TCGA-DD-AAVR-01A-11R-A41C-07 male asian not hispanic or latino 69 165 Liver stage i c22.0 alive NA 44
    TCGA-MR-A8JO-01A-12R-A36F-07 male white not reported 90 196 Liver stage i c22.0 alive NA 34
    TCGA-G3-A7M5-01A-11R-A33R-07 male asian not hispanic or latino 68 164 Liver stage i c22.0 alive NA 76
    TCGA-DD-A73F-01A-11R-A32O-07 female white not hispanic or latino 69 164 Liver stage i c22.0 alive NA 77
    TCGA-ED-A7PZ-01A-11R-A33R-07 male asian not hispanic or latino 50 159 Liver stage ii c22.0 alive NA 61
    TCGA-ED-A97K-01A-21R-A38B-07 male asian not hispanic or latino 64 170 Liver stage iiia c22.0 alive NA 54
    TCGA-DD-A3A1-01A-11R-A213-07 male not reported not reported 78 185 Liver stage iiia c22.0 dead 233 65
    TCGA-G3-A6UC-01A-21R-A33J-07 male white not hispanic or latino 91 182 Liver stage iiib c22.0 alive NA 65
    TCGA-DD-AACU-01A-11R-A41C-07 male asian not hispanic or latino 67 166 Liver stage i c22.0 alive NA 59
    TCGA-DD-A4NG-01A-11R-A27V-07 male white not hispanic or latino 94 164 Liver stage iiia c22.0 dead 802 77
    TCGA-DD-AADR-01A-11R-A41C-07 male asian not hispanic or latino 75 170 Liver stage i c22.0 alive NA 58
    TCGA-DD-AADG-01A-11R-A41C-07 male asian not hispanic or latino 61 160 Liver stage iiia c22.0 alive NA 70
    TCGA-G3-A3CG-01A-11R-A213-07 male white not hispanic or latino 93 168 Liver stage i c22.0 alive NA 80
    TCGA-BC-A10T-01A-11R-A131-07 male white not hispanic or latino 86 NA Liver not reported c22.0 dead 837 76
    TCGA-FV-A496-01A-11R-A266-07 female white not hispanic or latino 54 162 Liver stage i c22.0 alive NA 84
    TCGA-LG-A9QC-01A-11R-A37K-07 male white not hispanic or latino 103 188 Liver stage i c22.0 alive NA 48
    TCGA-DD-A4NV-01A-11R-A311-07 male white not hispanic or latino 129 179 Liver stage iiia c22.0 alive NA 61
    TCGA-DD-AACV-01A-11R-A41C-07 male asian not hispanic or latino 70 169 Liver stage i c22.0 alive NA 53
    TCGA-CC-A3M9-01A-11R-A213-07 male asian not hispanic or latino 61 174 Liver stage iiia c22.0 dead 300 45
    TCGA-UB-A7MF-01A-11R-A33J-07 male white not hispanic or latino 95 195 Liver stage iiia c22.0 dead 214 56
    TCGA-DD-AAVV-01A-11R-A41C-07 male asian not hispanic or latino 71 158 Liver stage ii c22.0 alive NA 56
    TCGA-ZP-A9CV-01A-11R-A38B-07 male white not hispanic or latino 59 173 Liver not reported c22.0 dead 1088 59
    TCGA-ZS-A9CD-01A-11R-A37K-07 male white not hispanic or latino NA NA Liver stage ii c22.0 dead 1386 73
    TCGA-4R-AA8I-01A-11R-A38B-07 male white not hispanic or latino 103 171 Liver stage ii c22.0 dead 262 66
    TCGA-DD-AACJ-01A-11R-A41C-07 male asian not hispanic or latino 73 159 Liver stage ii c22.0 alive NA 75
    TCGA-BD-A3ER-01A-11R-A213-07 male white not hispanic or latino 111 188 Liver stage ii c22.0 alive NA 62
    TCGA-LG-A9QD-01A-11R-A38B-07 male white hispanic or latino 74 168 Liver stage iiia c22.0 alive NA 68
    TCGA-3K-AAZ8-01A-12R-A39D-07 male black or african american not hispanic or latino 84 172 Liver stage iiib c22.0 alive NA 65
    TCGA-CC-A8HT-01A-11R-A36F-07 male asian not hispanic or latino 48 159 Liver stage iiia c22.0 dead 140 74
    TCGA-EP-A12J-01A-11R-A131-07 male black or african american not hispanic or latino NA 173 Liver stage i c22.0 alive NA 62
    TCGA-2Y-A9GS-01A-12R-A38B-07 male white hispanic or latino 92 162 Liver not reported c22.0 dead 724 58
    TCGA-DD-AADP-01A-11R-A39D-07 male asian not hispanic or latino 67 167 Liver stage i c22.0 alive NA 45
    TCGA-DD-AADI-01A-11R-A41C-07 female asian not hispanic or latino 64 165 Liver stage i c22.0 alive NA 43
    TCGA-DD-A116-01A-11R-A131-07 male asian not hispanic or latino 73 175 Liver stage iiia c22.0 dead 1622 68
    TCGA-G3-A5SL-01A-11R-A27V-07 male white not hispanic or latino 88 180 Liver stage ii c22.0 alive NA 70
    TCGA-NI-A4U2-01A-11R-A28V-07 male white not hispanic or latino 82 171 Liver stage iiia c22.0 dead 1791 71
    TCGA-2Y-A9H3-01A-11R-A38B-07 male white hispanic or latino 105 179 Liver stage ii c22.0 alive NA 45
    TCGA-2Y-A9H1-01A-11R-A38B-07 male white not hispanic or latino 89 171 Liver stage i c22.0 dead 1229 58
    TCGA-DD-AADO-01A-11R-A41C-07 male asian not hispanic or latino 58 168 Liver stage i c22.0 alive NA 55
    TCGA-DD-AAVS-01A-11R-A41C-07 male asian not hispanic or latino 72 169 Liver stage i c22.0 alive NA 56
    TCGA-EP-A3JL-01A-11R-A213-07 male white not hispanic or latino 73 168 Liver stage i c22.0 alive NA 76
    TCGA-2Y-A9HA-01A-11R-A39D-07 male white not hispanic or latino 69 169 Liver stage ii c22.0 dead 36 70
    TCGA-BC-A112-01A-11R-A131-07 male white not hispanic or latino 97 165 Liver not reported c22.0 dead 153 80
    TCGA-ED-A7PY-01A-11R-A33R-07 female asian not hispanic or latino 40 156 Liver stage ii c22.0 alive NA 20
    TCGA-ED-A627-01A-12R-A311-07 male white not hispanic or latino 74 176 Liver stage i c22.0 alive NA 74
    TCGA-DD-A1EK-01A-11R-A213-07 female white not hispanic or latino 97 159 Liver stage ivb c22.0 dead 558 64
    TCGA-DD-AAE6-01A-11R-A41C-07 female asian not hispanic or latino 46 159 Liver stage i c22.0 alive NA 59
    TCGA-RC-A6M6-01A-11R-A32O-07 male white not hispanic or latino NA NA Liver stage ii c22.0 alive NA NA
    TCGA-G3-AAV6-01A-21R-A37K-07 female white not hispanic or latino 78 165 Liver stage iiia c22.0 dead 65 53
    TCGA-DD-A4NS-01A-11R-A311-07 female white not hispanic or latino 58 167 Liver stage i c22.0 dead 2456 61
    TCGA-CC-5263-01A-01R-A131-07 male asian not hispanic or latino 59 163 Liver stage iiia c22.0 dead 129 35
    TCGA-MI-A75C-01A-11R-A32O-07 male white not hispanic or latino 84 175 Liver stage i c22.0 alive NA 64
    TCGA-DD-AADL-01A-11R-A41C-07 male asian not hispanic or latino 53 159 Liver stage i c22.0 alive NA 58
    TCGA-FV-A3I0-01A-11R-A22L-07 female white not hispanic or latino NA NA Liver stage ii c22.0 alive NA 76
    TCGA-ED-A82E-01A-11R-A352-07 female asian not hispanic or latino 44 150 Liver stage iiia c22.0 alive NA 60
    TCGA-CC-A7II-01A-11R-A33J-07 male asian not hispanic or latino 52 168 Liver stage iiia c22.0 alive NA 54
    TCGA-DD-A3A4-01A-11R-A22L-07 male white not hispanic or latino 65 189 Liver stage iiia c22.0 dead 612 37
    TCGA-DD-AACE-01A-11R-A41C-07 male asian not hispanic or latino 62 162 Liver stage i c22.0 alive NA 62
    TCGA-DD-AAC9-01A-11R-A41C-07 male asian not hispanic or latino 81 174 Liver stage i c22.0 alive NA 51
    TCGA-RC-A7SK-01A-11R-A352-07 male asian not hispanic or latino 60 169 Liver stage i c22.0 alive NA 59
    TCGA-DD-AAEA-01A-11R-A41C-07 male asian not hispanic or latino 66 163 Liver stage i c22.0 alive NA 65
    TCGA-UB-AA0U-01A-11R-A38B-07 male white not hispanic or latino 93 178 Liver stage ii c22.0 alive NA 60
    TCGA-DD-A113-01A-11R-A131-07 female white not hispanic or latino 56 154 Liver stage ii c22.0 alive NA 55
    TCGA-UB-A7MB-01A-11R-A33R-07 male white not hispanic or latino 62 180 Liver stage ii c22.0 alive NA 24
    TCGA-DD-AAVX-01A-11R-A41C-07 male asian not hispanic or latino 65 178 Liver stage ii c22.0 alive NA 38
    TCGA-QA-A7B7-01A-11R-A32O-07 male black or african american not hispanic or latino 108 180 Liver stage ii c22.0 alive NA 48
    TCGA-2Y-A9HB-01A-11R-A39D-07 male not reported hispanic or latino 74 167 Liver stage i c22.0 alive NA 66
    TCGA-2Y-A9GU-01A-11R-A38B-07 female white not hispanic or latino 78 154 Liver stage i c22.0 alive NA 55
    TCGA-DD-AADD-01A-11R-A41C-07 male asian not hispanic or latino 68 168 Liver stage i c22.0 alive NA 51
    TCGA-G3-A3CI-01A-11R-A213-07 male white not hispanic or latino 98 167 Liver stage i c22.0 alive NA 71
    TCGA-CC-A7IL-01A-11R-A33R-07 male asian not hispanic or latino 63 174 Liver stage iiia c22.0 dead 278 61
    TCGA-DD-AACG-01A-11R-A41C-07 male asian not hispanic or latino 65 168 Liver stage ii c22.0 dead 469 52
    TCGA-DD-A73A-01A-12R-A32O-07 male white not hispanic or latino 102 174 Liver stage i c22.0 alive NA 71
    TCGA-ED-A66X-01A-11R-A311-07 male asian not hispanic or latino 61 170 Liver stage iiia c22.0 alive NA 35
    TCGA-EP-A26S-01A-11R-A16W-07 male white not hispanic or latino 41 168 Liver stage i c22.0 alive NA 70
    TCGA-G3-A25S-01A-11R-A16W-07 male white not hispanic or latino 73 166 Liver stage i c22.0 dead 416 64
    TCGA-DD-A4NN-01A-11R-A28V-07 female white not hispanic or latino 59 163 Liver stage i c22.0 dead 899 56
    TCGA-G3-A25U-01A-11R-A16W-07 female asian not hispanic or latino 47 153 Liver stage i c22.0 alive NA 63
    TCGA-YA-A8S7-01A-11R-A37K-07 male white hispanic or latino 73 164 Liver stage iiia c22.0 dead 412 68
    TCGA-2Y-A9H6-01A-11R-A39D-07 female white not hispanic or latino 99 156 Liver stage i c22.0 alive NA 68
    TCGA-DD-A4NE-01A-11R-A27V-07 female white hispanic or latino 79 170 Liver stage iiia c22.0 dead 660 75
    TCGA-FV-A495-01A-11R-A266-07 female white not hispanic or latino 70 172 Liver stage ii c22.0 alive NA 51
    TCGA-DD-AAEG-01A-11R-A39D-07 female asian not hispanic or latino 40 149 Liver stage i c22.0 alive NA 59
    TCGA-UB-A7ME-01A-11R-A33J-07 male asian not hispanic or latino 75 165 Liver stage i c22.0 alive NA 51
    TCGA-DD-A39Y-01A-11R-A213-07 male asian not hispanic or latino 85 176 Liver stage i c22.0 dead 171 67
    TCGA-DD-A4NA-01A-11R-A266-07 female white not hispanic or latino 93 166 Liver stage iiic c22.0 alive NA 67
    TCGA-FV-A3I1-01A-11R-A22L-07 female white not hispanic or latino NA NA Liver stage ii c22.0 dead 247 81
    TCGA-DD-A4NQ-01A-21R-A28V-07 male white hispanic or latino 75 159 Liver stage ii c22.0 dead 373 60
    TCGA-DD-A4ND-01A-11R-A266-07 female white not hispanic or latino 89 162 Liver stage i c22.0 alive NA 56
    TCGA-DD-AAVY-01A-11R-A41C-07 male asian not hispanic or latino 63 161 Liver stage iiia c22.0 alive NA 56
    TCGA-UB-A7MD-01A-12R-A352-07 male black or african american not hispanic or latino 57 175 Liver stage i c22.0 dead 52 67
    TCGA-DD-A3A6-01A-11R-A22L-07 female white not hispanic or latino 52 175 Liver stage ii c22.0 dead 3258 72
    TCGA-CC-A9FV-01A-11R-A37K-07 male asian not hispanic or latino 59 165 Liver stage iiia c22.0 alive NA 57
    TCGA-ED-A4XI-01A-11R-A266-07 male asian not hispanic or latino 55 170 Liver stage ii c22.0 alive NA 58
    TCGA-LG-A6GG-01A-11R-A311-07 female white not hispanic or latino 65 158 Liver stage ii c22.0 alive NA 79
    TCGA-RC-A6M3-01A-11R-A32O-07 male american indian or alaska native not reported NA 175 Liver stage ii c22.0 alive NA NA
    TCGA-DD-AAE4-01A-11R-A41C-07 female asian not hispanic or latino 62 157 Liver stage i c22.0 alive NA 49
    TCGA-BW-A5NQ-01A-11R-A27V-07 male white not hispanic or latino NA NA Liver stage i c22.0 alive NA 63
    TCGA-FV-A23B-01A-11R-A16W-07 female white not hispanic or latino NA NA Liver stage ii c22.0 dead 1852 70
    TCGA-CC-5260-01A-01R-A131-07 female asian not hispanic or latino 46 153 Liver stage iiic c22.0 dead 87 61
    TCGA-DD-A1EH-01A-11R-A131-07 male white not hispanic or latino 70 179 Liver stage iii c22.0 alive NA 23
    TCGA-G3-A3CJ-01A-11R-A213-07 male american indian or alaska native not hispanic or latino 72 174 Liver stage ii c22.0 alive NA 52
    TCGA-ZP-A9D2-01A-11R-A38B-07 male white not hispanic or latino 74 172 Liver not reported c22.0 dead 765 51
    TCGA-ED-A7XP-01A-11R-A352-07 female asian not hispanic or latino 54 157 Liver stage ii c22.0 alive NA 53
    TCGA-DD-AACZ-01A-11R-A41C-07 female asian not hispanic or latino 52 149 Liver stage i c22.0 dead 171 63
    TCGA-ED-A5KG-01A-11R-A27V-07 female asian not hispanic or latino 61 160 Liver stage ii c22.0 alive NA 60
    TCGA-BC-A110-01A-11R-A131-07 female black or african american not hispanic or latino 91 155 Liver not reported c22.0 dead 2116 51
    TCGA-DD-AADU-01A-11R-A41C-07 male asian not hispanic or latino 73 166 Liver stage ii c22.0 alive NA 60
    TCGA-2Y-A9H2-01A-12R-A38B-07 female white not hispanic or latino 55 176 Liver stage i c22.0 alive NA 64
    TCGA-CC-A8HS-01A-11R-A36F-07 male asian not hispanic or latino 62 172 Liver stage iiic c22.0 dead 300 18
    TCGA-2Y-A9GV-01A-11R-A38B-07 female white not hispanic or latino 85 167 Liver stage i c22.0 dead 2532 54
    TCGA-G3-A5SM-01A-12R-A28V-07 male white not hispanic or latino 106 184 Liver stage ii c22.0 alive NA 58
    TCGA-FV-A2QR-01A-11R-A213-07 male white not hispanic or latino NA NA Liver stage i c22.0 dead 581 75
    TCGA-5R-AA1D-01A-11R-A38B-07 female white not hispanic or latino 59 161 Liver stage iiia c22.0 alive NA 17
    TCGA-RC-A6M5-01A-11R-A32O-07 female white not reported NA NA Liver stage iva c22.0 alive NA NA
    TCGA-WQ-AB4B-01A-11R-A41C-07 male white not hispanic or latino 122 175 Liver stage ii c22.0 alive NA 62
    TCGA-DD-AACA-01A-11R-A41C-07 male asian not hispanic or latino 70 165 Liver stage i c22.0 alive NA 65
    TCGA-DD-AACA-02A-11R-A41C-07 male asian not hispanic or latino 70 165 Liver stage i c22.0 alive NA 65
    TCGA-DD-AACA-02B-11R-A41C-07 male asian not hispanic or latino 70 165 Liver stage i c22.0 alive NA 65
    TCGA-FV-A2QQ-01A-11R-A22L-07 male white not hispanic or latino NA NA Liver stage i c22.0 alive NA 80
    TCGA-2Y-A9GX-01A-11R-A38B-07 male white not hispanic or latino 104 175 Liver stage i c22.0 alive NA 68
    TCGA-G3-AAUZ-01A-11R-A38B-07 male not reported hispanic or latino 77 160 Liver stage i c22.0 alive NA 48
    TCGA-DD-AACK-01A-11R-A41C-07 male asian not hispanic or latino 68 172 Liver stage i c22.0 alive NA 70
    TCGA-DD-A3A5-01A-11R-A22L-07 female white not hispanic or latino 58 170 Liver stage iii c22.0 dead 3125 66
    TCGA-DD-AACY-01A-11R-A41C-07 male asian not hispanic or latino 62 162 Liver stage i c22.0 alive NA 61
    TCGA-DD-A39V-01A-11R-A213-07 male white not hispanic or latino 79 174 Liver stage ii c22.0 dead 643 77
    TCGA-BD-A3EP-01A-11R-A22L-07 female black or african american not hispanic or latino 71 168 Liver stage i c22.0 alive NA 75
    TCGA-BC-A10Q-01A-11R-A131-07 female white not hispanic or latino NA NA Liver not reported c22.0 dead 1135 72
    TCGA-DD-A4NL-01A-11R-A28V-07 male white not hispanic or latino 113 173 Liver stage i c22.0 alive NA 46
    TCGA-CC-A7IF-01A-11R-A33J-07 male asian not hispanic or latino 58 169 Liver stage iiia c22.0 dead 649 59
    TCGA-DD-A73E-01A-12R-A32O-07 male white not hispanic or latino 108 172 Liver stage i c22.0 alive NA 66
    TCGA-CC-A123-01A-11R-A131-07 female asian not hispanic or latino NA NA Liver stage iiia c22.0 alive NA 24
    TCGA-DD-AADY-01A-11R-A41C-07 female asian not hispanic or latino 55 161 Liver stage i c22.0 alive NA 55
    TCGA-CC-A7IH-01A-11R-A33J-07 male asian not hispanic or latino 56 175 Liver stage iiia c22.0 alive NA 58
    TCGA-DD-AADA-01A-11R-A41C-07 female asian not hispanic or latino 59 147 Liver stage i c22.0 alive NA 66
    TCGA-CC-A7IJ-01A-11R-A33R-07 male asian not hispanic or latino 54 165 Liver stage ii c22.0 alive NA 56
    TCGA-DD-AACI-01A-11R-A41C-07 male asian not hispanic or latino 48 155 Liver stage ii c22.0 alive NA 69
    TCGA-UB-AA0V-01A-11R-A38B-07 female white not hispanic or latino 57 175 Liver stage i c22.0 alive NA 69
    TCGA-CC-A7IK-01A-12R-A33R-07 male asian not hispanic or latino 57 168 Liver stage iiia c22.0 dead 262 59
    TCGA-XR-A8TE-01A-11R-A36F-07 male white hispanic or latino 43 157 Liver stage iiia c22.0 alive NA NA
    TCGA-DD-AACC-01A-11R-A41C-07 male asian not hispanic or latino 61 165 Liver stage i c22.0 dead 1685 61
    TCGA-BW-A5NO-01A-11R-A27V-07 male black or african american not hispanic or latino NA NA Liver stage iiia c22.0 alive NA 50
    TCGA-G3-AAV1-01A-11R-A38B-07 male asian not hispanic or latino 99 181 Liver stage iiic c22.0 dead 359 51
    TCGA-2Y-A9H9-01A-21R-A39D-07 male white not hispanic or latino 88 178 Liver stage i c22.0 alive NA 70
    TCGA-G3-AAV3-01A-11R-A37K-07 female white not hispanic or latino 85 168 Liver stage ii c22.0 alive NA 58
    TCGA-DD-AAEB-01A-11R-A41C-07 male asian not hispanic or latino 75 161 Liver stage i c22.0 alive NA 60
    TCGA-EP-A3RK-01A-11R-A22L-07 male white not hispanic or latino 101 178 Liver stage iiia c22.0 alive NA 73
    TCGA-MI-A75H-01A-11R-A32O-07 male white not hispanic or latino 84 173 Liver not reported c22.0 alive NA 77
    TCGA-G3-A25V-01A-11R-A16W-07 male white not hispanic or latino 90 187 Liver stage i c22.0 alive NA 68
    TCGA-BC-A8YO-01A-11R-A37K-07 female white not hispanic or latino 74 170 Liver stage iiic c22.0 alive NA 66
    TCGA-RC-A7S9-01A-11R-A33R-07 female asian not hispanic or latino 58 161 Liver stage i c22.0 alive NA 47
    TCGA-CC-A9FS-01A-11R-A37K-07 male asian not hispanic or latino 72 174 Liver stage ii c22.0 alive NA 55
    TCGA-G3-A25T-01A-11R-A16W-07 female white not hispanic or latino 64 167 Liver stage iiia c22.0 alive NA 45
    TCGA-UB-A7MC-01A-11R-A33R-07 male white not hispanic or latino 78 176 Liver stage iiia c22.0 alive NA 59
    TCGA-GJ-A3OU-01A-31R-A38B-07 male white not hispanic or latino 172 167 Liver stage i c22.0 alive NA 59
    TCGA-DD-AAEH-01A-11R-A41C-07 male asian not hispanic or latino 62 163 Liver stage i c22.0 alive NA 73
    TCGA-KR-A7K2-01A-12R-A33R-07 male white not reported 79 166 Liver stage i c22.0 alive NA 64
    Sample Gender Race Ethnicity Weight Height Anatomic location Stage Diagnosis Vital status Time to event Age

    Benchmarking OTTER networks

    The accuracy of OTTER cancer networks were benchmarked for their accuracy to predict ChIP-seq binding in comparison to other methods. The ground truth data can be found here.

    *refers to a modified input PPI and motif networks. For more details, please check this page.

    Contact

    Department of Biostatistics
    Harvard T.H. Chan School of Public Health

    License
    Share