GRAND

Hover over the bar plot to get the GO term. Differentially targeted genes and TFs were computed by comparing a cancer network to all other cancers.

Tool description

PANDA reconstructs a gene regulatory network using TF PPI, TF DNA binding motif, and gene expression samples. You can check the phenotypic information for the clinical variables of the samples that were used to reconstruct the network.

#	Tissue	Tool	netZoo release	Network	PPI	Motif	Expression	Regulator	nReg	Genes	Data	Samples	Precision	Reference
1	Pheochromocytoma and Paraganglioma	PANDA	netZooR 0.9	Adj Code Vis				TF	644	29375	TCGA	178	D

Variable description

This is a description of the primary clinical variables of the gene expression samples that were used to generate the gene regulatory network.

Sample	Gender	Race	Stage	Vital status	Age	Days to last follow up	Tumor ID
TCGA-RW-A688-01A	FEMALE	WHITE	-	Alive	69	37	PCPG
TCGA-QR-A6GR-01A	FEMALE	WHITE	-	Alive	30	703	PCPG
TCGA-S7-A7WQ-01A	MALE	WHITE	-	Alive	19	346	PCPG
TCGA-P8-A6RX-01A	MALE	WHITE	-	Alive	65	29	PCPG
TCGA-SR-A6MP-01A	FEMALE	WHITE	-	Alive	30	1558	PCPG
TCGA-QR-A70Q-01A	MALE	WHITE	-	Alive	33	140	PCPG
TCGA-S7-A7WW-01A	MALE	WHITE	-	Alive	34	324	PCPG
TCGA-SR-A6MV-01A	FEMALE	WHITE	-	Alive	35	3269	PCPG
TCGA-QT-A5XK-01A	FEMALE	BLACK OR AFRICAN AMERICAN	-	Alive	56	211	PCPG
TCGA-WB-A80L-01A	FEMALE	WHITE	-	Alive	30	678	PCPG
TCGA-WB-A81Q-01A	MALE	WHITE	-	Dead	44	[Not Available]	PCPG
TCGA-QR-A703-01A	MALE	WHITE	-	Alive	23	1167	PCPG
TCGA-RW-A684-01A	FEMALE	WHITE	-	Alive	64	32	PCPG
TCGA-SR-A6N0-01A	FEMALE	WHITE	-	Alive	45	1106	PCPG
TCGA-WB-A81T-01A	MALE	WHITE	-	Alive	45	288	PCPG
TCGA-QT-A5XL-01A	MALE	WHITE	-	Alive	27	55	PCPG
TCGA-SR-A6MX-01A	MALE	WHITE	-	Dead	55	[Not Available]	PCPG
TCGA-QR-A70M-01A	MALE	WHITE	-	Alive	38	1034	PCPG
TCGA-QT-A5XP-01A	FEMALE	BLACK OR AFRICAN AMERICAN	-	Alive	57	134	PCPG
TCGA-SR-A6MQ-01A	FEMALE	ASIAN	-	Alive	61	1656	PCPG
TCGA-RW-A680-01A	FEMALE	WHITE	-	Alive	57	1013	PCPG
TCGA-QR-A7IP-01A	MALE	WHITE	-	Alive	30	546	PCPG
TCGA-QR-A70I-01A	MALE	BLACK OR AFRICAN AMERICAN	-	Alive	24	910	PCPG
TCGA-WB-A80M-01A	MALE	WHITE	-	Alive	63	136	PCPG
TCGA-QR-A70W-01A	MALE	WHITE	-	Alive	40	1271	PCPG
TCGA-QR-A70H-01A	MALE	WHITE	-	Alive	36	816	PCPG
TCGA-RT-A6Y9-01A	FEMALE	WHITE	-	Alive	50	2957	PCPG
TCGA-QR-A6GX-01A	FEMALE	BLACK OR AFRICAN AMERICAN	-	Alive	28	579	PCPG
TCGA-RW-A68C-01A	MALE	WHITE	-	Alive	43	191	PCPG
TCGA-QR-A70T-01A	FEMALE	BLACK OR AFRICAN AMERICAN	-	Alive	40	267	PCPG
TCGA-P8-A5KC-01A	MALE	WHITE	-	Alive	48	883	PCPG
TCGA-QR-A702-01A	FEMALE	WHITE	-	Alive	75	39	PCPG
TCGA-RW-A7CZ-01A	FEMALE	WHITE	-	Alive	72	134	PCPG
TCGA-SQ-A6I6-01A	MALE	WHITE	-	Alive	39	3	PCPG
TCGA-WB-A820-01A	MALE	WHITE	-	Dead	40	[Not Available]	PCPG
TCGA-TT-A6YO-01A	FEMALE	BLACK OR AFRICAN AMERICAN	-	Alive	64	317	PCPG
TCGA-WB-A80Y-01A	FEMALE	WHITE	-	Dead	59	[Not Available]	PCPG
TCGA-WB-A81J-01A	MALE	WHITE	-	Alive	40	57	PCPG
TCGA-PR-A5PG-01A	FEMALE	WHITE	-	Alive	42	1094	PCPG
TCGA-QR-A70A-01A	FEMALE	WHITE	-	Alive	54	2119	PCPG
TCGA-WB-A81G-01A	MALE	WHITE	-	Alive	25	737	PCPG
TCGA-QR-A6H0-01A	MALE	WHITE	-	Alive	53	280	PCPG
TCGA-QR-A6GS-01A	FEMALE	WHITE	-	Alive	51	38	PCPG
TCGA-SQ-A6I4-01A	MALE	WHITE	-	Alive	53	43	PCPG
TCGA-QR-A707-01A	FEMALE	WHITE	-	Alive	43	398	PCPG
TCGA-QR-A6GT-01A	FEMALE	WHITE	-	Alive	63	4185	PCPG
TCGA-WB-A80O-01A	FEMALE	WHITE	-	Alive	83	128	PCPG
TCGA-QR-A70K-01A	MALE	WHITE	-	Alive	61	274	PCPG
TCGA-S7-A7WU-01A	FEMALE	WHITE	-	Alive	63	601	PCPG
TCGA-WB-A81P-01A	FEMALE	WHITE	-	Alive	73	395	PCPG
TCGA-QR-A70R-01A	MALE	WHITE	-	Alive	43	432	PCPG
TCGA-WB-A81I-01A	MALE	WHITE	-	Alive	64	34	PCPG
TCGA-QR-A6GU-01A	MALE	WHITE	-	Alive	31	1791	PCPG
TCGA-QR-A70O-01A	FEMALE	WHITE	-	Alive	35	111	PCPG
TCGA-W2-A7HD-01A	FEMALE	WHITE	-	Alive	76	218	PCPG
TCGA-WB-A81N-01A	FEMALE	WHITE	-	Alive	28	1406	PCPG
TCGA-QR-A6H4-01A	FEMALE	WHITE	-	Alive	56	2661	PCPG
TCGA-QR-A705-01A	FEMALE	WHITE	-	Alive	63	317	PCPG
TCGA-RW-A8AZ-01A	MALE	WHITE	-	Dead	66	[Not Available]	PCPG
TCGA-QR-A70P-01A	FEMALE	WHITE	-	Dead	45	[Not Available]	PCPG
TCGA-S7-A7WX-01A	MALE	WHITE	-	Alive	52	358	PCPG
TCGA-QR-A708-01A	FEMALE	WHITE	-	Alive	44	35	PCPG
TCGA-QR-A6H3-01A	MALE	WHITE	-	Alive	41	434	PCPG
TCGA-SA-A6C2-01A	FEMALE	BLACK OR AFRICAN AMERICAN	-	Alive	46	296	PCPG
TCGA-QR-A70J-01A	FEMALE	WHITE	-	Alive	42	399	PCPG
TCGA-S7-A7WM-01A	MALE	WHITE	-	Alive	76	730	PCPG
TCGA-SR-A6MY-01A	FEMALE	WHITE	-	Alive	54	456	PCPG
TCGA-RW-A68A-01A	FEMALE	WHITE	-	Alive	19	397	PCPG
TCGA-W2-A7HH-01A	FEMALE	WHITE	-	Alive	69	188	PCPG
TCGA-WB-A81E-01A	FEMALE	WHITE	-	Alive	47	1131	PCPG
TCGA-W2-A7H7-01A	MALE	WHITE	-	Alive	59	109	PCPG
TCGA-QT-A7U0-01A	MALE	WHITE	-	Alive	56	29	PCPG
TCGA-RW-A689-01A	MALE	WHITE	-	Alive	58	356	PCPG
TCGA-WB-A80P-01A	MALE	WHITE	-	Alive	20	9219	PCPG
TCGA-RW-A67V-01A	FEMALE	WHITE	-	Alive	44	2643	PCPG
TCGA-S7-A7WL-01A	MALE	WHITE	-	Alive	59	611	PCPG
TCGA-W2-A7HF-01A	FEMALE	BLACK OR AFRICAN AMERICAN	-	Alive	28	137	PCPG
TCGA-WB-A819-01A	MALE	WHITE	-	Alive	36	234	PCPG
TCGA-SP-A6QD-01A	MALE	[Not Evaluated]	-	Alive	26	3087	PCPG
TCGA-WB-A80V-01A	FEMALE	WHITE	-	Alive	63	215	PCPG
TCGA-WB-A81W-01A	MALE	WHITE	-	Alive	41	1719	PCPG
TCGA-S7-A7WN-01A	MALE	WHITE	-	Alive	40	800	PCPG
TCGA-RW-A686-01A	MALE	WHITE	-	Alive	62	405	PCPG
TCGA-TT-A6YK-01A	MALE	WHITE	-	Alive	61	765	PCPG
TCGA-P8-A5KD-01A	FEMALE	WHITE	-	Alive	35	69	PCPG
TCGA-QR-A6GW-01A	FEMALE	WHITE	-	Alive	53	491	PCPG
TCGA-QR-A70N-01A	MALE	BLACK OR AFRICAN AMERICAN	-	Alive	32	43	PCPG
TCGA-SR-A6MR-01A	MALE	WHITE	-	Alive	41	2020	PCPG
TCGA-RW-A68G-01A	MALE	WHITE	-	Alive	49	21	PCPG
TCGA-WB-A80K-01A	MALE	WHITE	-	Alive	49	840	PCPG
TCGA-RW-A68F-01A	FEMALE	WHITE	-	Alive	51	457	PCPG
TCGA-RW-A67W-01A	FEMALE	WHITE	-	Alive	46	604	PCPG
TCGA-RW-A68B-01A	MALE	[Not Evaluated]	-	Alive	31	242	PCPG
TCGA-QR-A6H1-01A	MALE	WHITE	-	Alive	55	431	PCPG
TCGA-SR-A6MS-01A	FEMALE	WHITE	-	Alive	35	2222	PCPG
TCGA-TT-A6YP-01A	FEMALE	WHITE	-	Alive	19	770	PCPG
TCGA-RW-A7D0-01A	FEMALE	WHITE	-	Alive	47	54	PCPG
TCGA-S7-A7X0-01A	FEMALE	WHITE	-	Alive	75	185	PCPG
TCGA-RW-A67X-01A	MALE	WHITE	-	Alive	47	89	PCPG
TCGA-TT-A6YJ-01A	FEMALE	[Unknown]	-	Alive	45	132	PCPG
TCGA-P8-A6RY-01A	MALE	WHITE	-	Alive	55	179	PCPG
TCGA-QR-A6ZZ-01A	FEMALE	WHITE	-	Alive	30	48	PCPG
TCGA-RW-A68D-01A	FEMALE	ASIAN	-	Alive	31	2214	PCPG
TCGA-QR-A6GO-01A	MALE	WHITE	-	Alive	43	1065	PCPG
TCGA-RX-A8JQ-01A	MALE	WHITE	-	Alive	44	18	PCPG
TCGA-WB-A822-01A	MALE	WHITE	-	Alive	23	2822	PCPG
TCGA-W2-A7H5-01B	FEMALE	WHITE	-	Alive	25	307	PCPG
TCGA-S7-A7WV-01A	FEMALE	WHITE	-	Alive	35	527	PCPG
TCGA-SR-A6MT-01A	FEMALE	WHITE	-	Alive	57	3247	PCPG
TCGA-QT-A5XJ-01A	FEMALE	BLACK OR AFRICAN AMERICAN	-	Alive	42	773	PCPG
TCGA-W2-A7UY-01A	FEMALE	WHITE	-	Alive	44	24	PCPG
TCGA-SP-A6QH-01A	FEMALE	ASIAN	-	Alive	35	1857	PCPG
TCGA-S7-A7WT-01A	MALE	WHITE	-	Alive	74	912	PCPG
TCGA-WB-A81R-01A	FEMALE	WHITE	-	Alive	55	49	PCPG
TCGA-QR-A7IN-01A	FEMALE	BLACK OR AFRICAN AMERICAN	-	Alive	52	377	PCPG
TCGA-QT-A5XN-01A	FEMALE	BLACK OR AFRICAN AMERICAN	-	Alive	51	766	PCPG
TCGA-WB-A81A-01A	FEMALE	WHITE	-	Alive	65	371	PCPG
TCGA-WB-A816-01A	FEMALE	WHITE	-	Alive	42	531	PCPG
TCGA-QR-A6H5-01A	FEMALE	BLACK OR AFRICAN AMERICAN	-	Alive	30	959	PCPG
TCGA-QR-A70G-01B	MALE	BLACK OR AFRICAN AMERICAN	-	Alive	54	71	PCPG
TCGA-P7-A5NY-01A	FEMALE	WHITE	-	Alive	21	195	PCPG
TCGA-SP-A6QF-01A	MALE	ASIAN	-	Alive	48	2149	PCPG
TCGA-SP-A6QJ-01A	FEMALE	WHITE	-	Alive	64	274	PCPG
TCGA-RT-A6YA-01A	FEMALE	WHITE	-	Alive	71	1249	PCPG
TCGA-WB-A815-01A	FEMALE	WHITE	-	Alive	68	182	PCPG
TCGA-SP-A6QC-01A	MALE	WHITE	-	Alive	46	3180	PCPG
TCGA-QR-A6GY-01A	FEMALE	WHITE	-	Alive	37	32	PCPG
TCGA-QT-A69Q-01A	MALE	WHITE	-	Alive	40	24	PCPG
TCGA-WB-A817-01A	MALE	WHITE	-	Alive	27	700	PCPG
TCGA-QR-A70E-01A	FEMALE	WHITE	-	Alive	31	192	PCPG
TCGA-RM-A68W-01A	FEMALE	WHITE	-	Alive	41	28	PCPG
TCGA-QR-A6H6-01A	MALE	WHITE	-	Alive	27	474	PCPG
TCGA-SP-A6QI-01A	MALE	WHITE	-	Alive	47	2983	PCPG
TCGA-W2-A7HB-01A	MALE	WHITE	-	Alive	24	224	PCPG
TCGA-W2-A7HC-01A	MALE	WHITE	-	Alive	67	62	PCPG
TCGA-QR-A70U-01A	FEMALE	WHITE	-	Alive	46	1473	PCPG
TCGA-WB-A81K-01A	MALE	WHITE	-	Alive	45	595	PCPG
TCGA-QR-A700-01A	MALE	WHITE	-	Alive	67	978	PCPG
TCGA-QR-A70X-01A	FEMALE	BLACK OR AFRICAN AMERICAN	-	Alive	46	183	PCPG
TCGA-RT-A6YC-01A	MALE	WHITE	-	Alive	31	246	PCPG
TCGA-S7-A7WP-01A	FEMALE	WHITE	-	Alive	25	441	PCPG
TCGA-SR-A6MU-01A	FEMALE	WHITE	-	Alive	49	3362	PCPG
TCGA-P7-A5NX-01A	FEMALE	WHITE	-	Alive	78	82	PCPG
TCGA-RM-A68T-01A	MALE	BLACK OR AFRICAN AMERICAN	-	Alive	46	1178	PCPG
TCGA-S7-A7X2-01A	FEMALE	WHITE	-	Alive	57	371	PCPG
TCGA-S7-A7X1-01A	MALE	WHITE	-	Alive	23	240	PCPG
TCGA-WB-A81H-01A	FEMALE	WHITE	-	Alive	44	1294	PCPG
TCGA-RW-A67Y-01A	FEMALE	WHITE	-	Alive	43	216	PCPG
TCGA-SR-A6MZ-01A	FEMALE	WHITE	-	Alive	46	345	PCPG
TCGA-WB-A818-01A	MALE	WHITE	-	Alive	37	795	PCPG
TCGA-WB-A814-01A	FEMALE	BLACK OR AFRICAN AMERICAN	-	Alive	35	1000	PCPG
TCGA-W2-A7HA-01B	FEMALE	AMERICAN INDIAN OR ALASKA NATIVE	-	Alive	63	36	PCPG
TCGA-XG-A823-01A	FEMALE	WHITE	-	Alive	25	210	PCPG
TCGA-RW-A685-01A	FEMALE	WHITE	-	Alive	70	26	PCPG
TCGA-W2-A7HE-01A	MALE	WHITE	-	Alive	80	195	PCPG
TCGA-WB-A81M-01A	FEMALE	WHITE	-	Alive	42	652	PCPG
TCGA-WB-A80N-01A	MALE	WHITE	-	Alive	54	144	PCPG
TCGA-QT-A5XM-01A	MALE	WHITE	-	Alive	43	22	PCPG
TCGA-QR-A70C-01A	FEMALE	BLACK OR AFRICAN AMERICAN	-	Alive	51	3534	PCPG
TCGA-QR-A6H2-01A	MALE	ASIAN	-	Alive	33	302	PCPG
TCGA-WB-A81D-01A	FEMALE	WHITE	-	Alive	82	24	PCPG
TCGA-PR-A5PH-01A	MALE	WHITE	-	Alive	47	852	PCPG
TCGA-QT-A5XO-01A	FEMALE	BLACK OR AFRICAN AMERICAN	-	Alive	63	70	PCPG
TCGA-TT-A6YN-01A	FEMALE	WHITE	-	Alive	37	242	PCPG
TCGA-WB-A81V-01A	MALE	WHITE	-	Alive	57	2161	PCPG
TCGA-RW-A681-01A	MALE	WHITE	-	Alive	56	724	PCPG
TCGA-SP-A6QK-01A	FEMALE	ASIAN	-	Alive	46	3013	PCPG
TCGA-QR-A70D-01A	FEMALE	BLACK OR AFRICAN AMERICAN	-	Alive	39	7	PCPG
TCGA-PR-A5PF-01A	FEMALE	WHITE	-	Alive	62	240	PCPG
TCGA-QR-A70V-01A	FEMALE	[Unknown]	-	Alive	66	2	PCPG
TCGA-WB-A81F-01A	MALE	WHITE	-	Alive	40	730	PCPG
TCGA-S7-A7WR-01A	FEMALE	WHITE	-	Alive	32	909	PCPG
TCGA-WB-A821-01A	FEMALE	WHITE	-	Alive	73	41	PCPG
TCGA-WB-A81S-01A	FEMALE	WHITE	-	Alive	59	357	PCPG
TCGA-SP-A6QG-01A	FEMALE	WHITE	-	Alive	35	2040	PCPG
TCGA-S7-A7WO-01A	FEMALE	WHITE	-	Alive	76	715	PCPG
TCGA-WB-A80Q-01A	FEMALE	WHITE	-	Alive	64	3444	PCPG
TCGA-QR-A706-01A	FEMALE	WHITE	-	Alive	50	125	PCPG
Sample	Gender	Race	Stage	Status	Age	Days to follow up	Tumor ID

PCPG cancer networks

Networks

Tool description

Phenotypic information TCGA

Variable description