Hover over the bar plot to get the GO term. Differentially targeted genes and TFs were computed by comparing a cancer network to all other cancers.
Tool description
PANDA reconstructs a gene regulatory network using TF PPI, TF DNA binding motif, and gene expression samples. You can check the phenotypic information for the clinical variables of the samples that were used to reconstruct the network.
| # | Tissue | Tool | netZoo release | Network |
PPI |
Motif | Expression | TFs | Genes | Data | Samples | Precision |
Reference |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | Thymoma | PANDA | netZooR 0.9 | 644 | 29375 | TCGA | 119 | D |
Variable description
This is a description of the primary clinical variables of the gene expression samples that were used to generate the gene regulatory network.
| Sample |
Gender | Race | Stage |
Vital status | Age |
Days to last follow up | Tumor ID |
|---|---|---|---|---|---|---|---|
| TCGA-ZB-A96A-01A | MALE | WHITE | - | Alive | - | 325 | THYM |
| TCGA-XM-A8RL-01A | MALE | WHITE | - | Alive | - | 2241 | THYM |
| TCGA-4V-A9QX-01A | FEMALE | WHITE | - | Alive | - | 342 | THYM |
| TCGA-ZC-AAAH-01A | MALE | WHITE | - | Alive | - | 198 | THYM |
| TCGA-XM-A8R8-01A | FEMALE | ASIAN | - | Alive | - | 1112 | THYM |
| TCGA-3S-A8YW-01A | MALE | WHITE | - | Alive | - | 224 | THYM |
| TCGA-4X-A9F9-01A | FEMALE | WHITE | - | Alive | - | 305 | THYM |
| TCGA-ZC-AAAF-01A | FEMALE | WHITE | - | Alive | - | 874 | THYM |
| TCGA-4V-A9QW-01A | MALE | WHITE | - | Alive | - | 428 | THYM |
| TCGA-XU-AAXZ-01A | MALE | WHITE | - | Alive | - | 1537 | THYM |
| TCGA-XM-A8RC-01A | MALE | WHITE | - | Alive | - | 2631 | THYM |
| TCGA-ZB-A96Q-01A | MALE | WHITE | - | Alive | - | 218 | THYM |
| TCGA-4V-A9QR-01A | FEMALE | WHITE | - | Alive | - | 601 | THYM |
| TCGA-4V-A9QT-01A | FEMALE | WHITE | - | Alive | - | 660 | THYM |
| TCGA-5V-A9RR-01A | MALE | WHITE | - | Alive | - | 532 | THYM |
| TCGA-ZB-A96F-01A | MALE | WHITE | - | Alive | - | 5 | THYM |
| TCGA-X7-A8M8-01A | MALE | BLACK OR AFRICAN AMERICAN | - | Alive | - | 2533 | THYM |
| TCGA-X7-A8D8-01A | MALE | WHITE | - | Alive | - | 58 | THYM |
| TCGA-XU-AAY1-01A | FEMALE | ASIAN | - | Alive | - | 2052 | THYM |
| TCGA-ZB-A969-01A | FEMALE | WHITE | - | Alive | - | 20 | THYM |
| TCGA-XM-AAZ1-01A | MALE | WHITE | - | Alive | - | 306 | THYM |
| TCGA-3Q-A9WF-01A | MALE | BLACK OR AFRICAN AMERICAN | - | Alive | - | 235 | THYM |
| TCGA-4V-A9QM-01A | MALE | WHITE | - | Alive | - | 1171 | THYM |
| TCGA-3G-AB0Q-01A | MALE | WHITE | - | Alive | - | 1799 | THYM |
| TCGA-X7-A8M0-01A | FEMALE | WHITE | - | Alive | - | 441 | THYM |
| TCGA-ZB-A965-01A | FEMALE | WHITE | - | Alive | - | 504 | THYM |
| TCGA-XU-A931-01A | FEMALE | WHITE | - | Dead | - | [Not Available] | THYM |
| TCGA-XM-AAZ2-01A | MALE | BLACK OR AFRICAN AMERICAN | - | Alive | - | 657 | THYM |
| TCGA-X7-A8M3-01A | FEMALE | WHITE | - | Alive | - | 50 | THYM |
| TCGA-ZB-A96I-01A | FEMALE | WHITE | - | Alive | - | 158 | THYM |
| TCGA-ZB-A96H-01A | MALE | WHITE | - | Alive | - | 1140 | THYM |
| TCGA-XU-A92X-01A | MALE | ASIAN | - | Alive | - | 1065 | THYM |
| TCGA-4X-A9FA-01A | MALE | WHITE | - | Alive | - | 17 | THYM |
| TCGA-4V-A9QJ-01A | MALE | WHITE | - | Alive | - | 2702 | THYM |
| TCGA-4V-A9QL-01A | FEMALE | WHITE | - | Alive | - | 1726 | THYM |
| TCGA-XM-A8R9-01A | FEMALE | WHITE | - | Alive | - | 1119 | THYM |
| TCGA-X7-A8DF-01A | MALE | WHITE | - | Alive | - | 605 | THYM |
| TCGA-XM-A8RG-01A | MALE | WHITE | - | Alive | - | 15 | THYM |
| TCGA-X7-A8M1-01A | MALE | ASIAN | - | Alive | - | 1282 | THYM |
| TCGA-XU-A933-01A | FEMALE | ASIAN | - | Alive | - | 1603 | THYM |
| TCGA-XM-AAZ3-01A | MALE | WHITE | - | Alive | - | 940 | THYM |
| TCGA-XM-A8RI-01A | MALE | [Not Evaluated] | - | Alive | - | 92 | THYM |
| TCGA-ZB-A96K-01A | MALE | WHITE | - | Alive | - | 958 | THYM |
| TCGA-XU-A92Z-01A | MALE | ASIAN | - | Alive | - | 3320 | THYM |
| TCGA-XM-A8RH-01A | FEMALE | WHITE | - | Alive | - | 41 | THYM |
| TCGA-5K-AAAP-01A | MALE | WHITE | - | Alive | - | 1054 | THYM |
| TCGA-ZB-A96B-01A | MALE | WHITE | - | Alive | - | 1835 | THYM |
| TCGA-3G-AB0T-01A | MALE | WHITE | - | Dead | - | [Not Available] | THYM |
| TCGA-XU-A92Y-01A | FEMALE | WHITE | - | Dead | - | [Not Available] | THYM |
| TCGA-ZB-A96R-01A | MALE | WHITE | - | Alive | - | 1075 | THYM |
| TCGA-XH-A853-01A | MALE | BLACK OR AFRICAN AMERICAN | - | Alive | - | 915 | THYM |
| TCGA-ZB-A96G-01A | MALE | WHITE | - | Alive | - | 1012 | THYM |
| TCGA-4V-A9QI-01A | MALE | WHITE | - | Alive | - | 2714 | THYM |
| TCGA-XU-AAXW-01A | FEMALE | ASIAN | - | Alive | - | 3692 | THYM |
| TCGA-4X-A9FC-01A | FEMALE | WHITE | - | Alive | - | 1687 | THYM |
| TCGA-ZB-A96E-01A | MALE | WHITE | - | Alive | - | 7 | THYM |
| TCGA-ZB-A961-01A | MALE | WHITE | - | Alive | - | 4 | THYM |
| TCGA-ZB-A96O-01A | FEMALE | WHITE | - | Alive | - | 55 | THYM |
| TCGA-4X-A9FB-01A | MALE | WHITE | - | Alive | - | 353 | THYM |
| TCGA-ZC-AAA7-01A | MALE | WHITE | - | Dead | - | [Not Available] | THYM |
| TCGA-4X-A9FD-01A | FEMALE | WHITE | - | Alive | - | 1200 | THYM |
| TCGA-XM-A8RE-01A | FEMALE | WHITE | - | Alive | - | 8 | THYM |
| TCGA-YT-A95H-01A | MALE | WHITE | - | Alive | - | 389 | THYM |
| TCGA-ZB-A96V-01A | MALE | WHITE | - | Alive | - | 259 | THYM |
| TCGA-X7-A8D9-01A | FEMALE | WHITE | - | Alive | - | [Completed] | THYM |
| TCGA-XU-A92V-01A | FEMALE | ASIAN | - | Dead | - | [Not Available] | THYM |
| TCGA-XU-AAXV-01A | FEMALE | WHITE | - | Alive | - | 3709 | THYM |
| TCGA-X7-A8DD-01A | FEMALE | WHITE | - | Alive | - | 701 | THYM |
| TCGA-YT-A95G-01A | FEMALE | WHITE | - | Alive | - | 1184 | THYM |
| TCGA-YT-A95F-01A | FEMALE | WHITE | - | Alive | - | 586 | THYM |
| TCGA-4V-A9QU-01A | FEMALE | WHITE | - | Alive | - | 505 | THYM |
| TCGA-ZL-A9V6-01A | MALE | WHITE | - | Alive | - | 1334 | THYM |
| TCGA-XU-A92U-01A | MALE | WHITE | - | Alive | - | 4121 | THYM |
| TCGA-3G-AB0O-01A | MALE | WHITE | - | Alive | - | 1723 | THYM |
| TCGA-4V-A9QN-01A | FEMALE | WHITE | - | Alive | - | 879 | THYM |
| TCGA-X7-A8DJ-01A | MALE | [Unknown] | - | Alive | - | 72 | THYM |
| TCGA-ZB-A96M-01A | FEMALE | WHITE | - | Alive | - | 14 | THYM |
| TCGA-ZB-A966-01A | FEMALE | WHITE | - | Dead | - | [Not Available] | THYM |
| TCGA-3G-AB14-01A | MALE | WHITE | - | Alive | - | 540 | THYM |
| TCGA-XU-A92Q-01A | MALE | ASIAN | - | Alive | - | 1092 | THYM |
| TCGA-3G-AB19-01A | FEMALE | WHITE | - | Alive | - | 2756 | THYM |
| TCGA-5U-AB0E-01A | MALE | WHITE | - | Alive | - | 315 | THYM |
| TCGA-XM-A8RD-01A | FEMALE | WHITE | - | Alive | - | 1231 | THYM |
| TCGA-X7-A8M5-01A | FEMALE | WHITE | - | Alive | - | 1645 | THYM |
| TCGA-X7-A8D7-01A | FEMALE | BLACK OR AFRICAN AMERICAN | - | Alive | - | 325 | THYM |
| TCGA-ZB-A96D-01A | FEMALE | WHITE | - | Alive | - | 1302 | THYM |
| TCGA-X7-A8DE-01A | FEMALE | WHITE | - | Alive | - | 713 | THYM |
| TCGA-ZB-A964-01A | MALE | WHITE | - | Alive | - | 565 | THYM |
| TCGA-XU-A936-01A | FEMALE | WHITE | - | Alive | - | 521 | THYM |
| TCGA-ZB-A96C-01A | FEMALE | WHITE | - | Alive | - | 1321 | THYM |
| TCGA-X7-A8DB-01A | FEMALE | WHITE | - | Alive | - | 1537 | THYM |
| TCGA-YT-A95E-01A | MALE | WHITE | - | Alive | - | 405 | THYM |
| TCGA-4V-A9QS-01A | FEMALE | WHITE | - | Alive | - | 601 | THYM |
| TCGA-XU-A930-01A | MALE | WHITE | - | Alive | - | 2440 | THYM |
| TCGA-X7-A8M6-01A | MALE | WHITE | - | Alive | - | 4213 | THYM |
| TCGA-XU-A932-01A | MALE | ASIAN | - | Alive | - | 2018 | THYM |
| TCGA-X7-A8M7-01A | MALE | WHITE | - | Alive | - | 1972 | THYM |
| TCGA-YT-A95D-01A | FEMALE | WHITE | - | Alive | - | 568 | THYM |
| TCGA-ZC-AAAA-01A | MALE | WHITE | - | Alive | - | 529 | THYM |
| TCGA-ZT-A8OM-01A | FEMALE | WHITE | - | Alive | - | 0 | THYM |
| TCGA-XU-A92W-01A | MALE | WHITE | - | Alive | - | 2600 | THYM |
| TCGA-5U-AB0D-01A | FEMALE | WHITE | - | Alive | - | 352 | THYM |
| TCGA-5U-AB0F-01A | FEMALE | WHITE | - | Alive | - | 81 | THYM |
| TCGA-XU-A92O-01A | MALE | ASIAN | - | Alive | - | 3046 | THYM |
| TCGA-X7-A8D6-01A | FEMALE | WHITE | - | Alive | - | 4083 | THYM |
| TCGA-XU-A92T-01A | FEMALE | WHITE | - | Alive | - | 1012 | THYM |
| TCGA-ZB-A96P-01A | MALE | WHITE | - | Alive | - | 325 | THYM |
| TCGA-XM-A8RB-01A | FEMALE | BLACK OR AFRICAN AMERICAN | - | Alive | - | 766 | THYM |
| TCGA-X7-A8M4-01A | MALE | WHITE | - | Alive | - | 3808 | THYM |
| TCGA-5G-A9ZZ-01A | FEMALE | WHITE | - | Alive | - | 593 | THYM |
| TCGA-3T-AA9L-01A | FEMALE | WHITE | - | Alive | - | 36 | THYM |
| TCGA-X7-A8DG-01A | MALE | WHITE | - | Alive | - | 502 | THYM |
| TCGA-ZB-A963-01A | MALE | WHITE | - | Alive | - | 935 | THYM |
| TCGA-XU-AAY0-01A | FEMALE | ASIAN | - | Alive | - | 1140 | THYM |
| TCGA-XU-AAXX-01A | FEMALE | WHITE | - | Alive | - | 2356 | THYM |
| TCGA-ZB-A96L-01A | FEMALE | WHITE | - | Alive | - | 9 | THYM |
| TCGA-XM-A8RF-01A | FEMALE | WHITE | - | Alive | - | 797 | THYM |
| TCGA-3S-AAYX-01A | FEMALE | WHITE | - | Alive | - | 185 | THYM |
| TCGA-XU-AAXY-01A | MALE | WHITE | - | Alive | - | 1891 | THYM |
| Sample | Gender | Race | Stage | Status | Age | Days to follow up | Tumor ID |