To get the full list of phenotypic variables, please check the menu below.
Tool description
PANDA reconstructs a gene regulatory network using TF PPI, TF DNA binding motif as regulation prior, and gene expression samples. PUMA reconstructs a gene regulatory network with miRNA as regulators using gene expression samples and miRNA predicted targets by miRanda or TargetScan as regulation priors. The Regulator-regulator interaction matrix is set to the identity matrix in the algorithm. Check the phenotypic information for the clinical variables of the samples that were used to reconstruct the network.
| # | Tissue | Tool | netZoo release | Network |
PPI |
Regulation prior | Expression |
Regulator |
nReg |
Genes | Samples | Precision |
Reference |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | Lymphoblastoid cell line | PANDA | netZooM 0.1 | Motif | TF | 644 | 30243 | 132 | D | ||||
| 2 | Lymphoblastoid cell line | PUMA | netZooM 0.3 | - | miRanda | miRNA | 643 | 16161 | 132 | D | |||
| 3 | Lymphoblastoid cell line | PUMA | netZooM 0.3 | - | TargetScan | miRNA | 643 | 16161 | 132 | D | |||
| 4 | Lymphoblastoid cell line | EGRET | netZooR 0.9 | Motif | TF | 687 | 10198 | 119 | D | ||||
| 5 | Lymphoblastoid cell line | PANDA | netZooR 0.9 | Motif | TF | 687 | 10198 | 119 | D |
Variable description
This is a description of the primary clinical variables of the gene expression samples that were used to generate the gene regulatory network.
| Sample | Subject | Gender |
Age | DTH-HRDY |
SMAT-SSCR |
SMRIN |
SMTS |
SMUBRID |
SMTSISCH |
SMTSTPTREF |
|---|---|---|---|---|---|---|---|---|---|---|
| GTEX-1122O-0003-SM-5Q5DL | GTEX-1122O | 2 | 60-69 | 0 | - | 10 | Blood | EFO_0000572 | 1363 | Actual Death |
| GTEX-11EM3-0001-SM-5Q5BD | GTEX-11EM3 | 2 | 20-29 | 0 | - | 10 | Blood | EFO_0000572 | 1143 | Actual Death |
| GTEX-11EMC-0002-SM-5Q5DO | GTEX-11EMC | 2 | 60-69 | 2 | - | 10 | Blood | EFO_0000572 | 635 | Actual Death |
| GTEX-11EQ9-0002-SM-5QGQ1 | GTEX-11EQ9 | 1 | 30-39 | 2 | - | 10 | Blood | EFO_0000572 | -165 | Actual Death |
| GTEX-11I78-0001-SM-5Q5BE | GTEX-11I78 | 2 | 50-59 | 0 | - | 9.9 | Blood | EFO_0000572 | -86 | Actual Death |
| GTEX-11OC5-0004-SM-5S2O6 | GTEX-11OC5 | 1 | 60-69 | 2 | - | 9.9 | Blood | EFO_0000572 | 1171 | Actual Death |
| GTEX-11P7K-0003-SM-5S2OU | GTEX-11P7K | 1 | 30-39 | 0 | - | 10 | Blood | EFO_0000572 | -101 | Actual Death |
| GTEX-11TT1-0004-SM-5S2NT | GTEX-11TT1 | 1 | 20-29 | 0 | - | 10 | Blood | EFO_0000572 | -59 | Actual Death |
| GTEX-11VI4-0001-SM-5S2OI | GTEX-11VI4 | 2 | 40-49 | 0 | - | 10 | Blood | EFO_0000572 | -106 | Actual Death |
| GTEX-11ZTT-0002-SM-5S2PA | GTEX-11ZTT | 2 | 60-69 | 0 | - | 10 | Blood | EFO_0000572 | -15 | Actual Death |
| GTEX-1211K-0001-SM-5S2P9 | GTEX-1211K | 2 | 60-69 | 0 | - | 10 | Blood | EFO_0000572 | -66 | Actual Death |
| GTEX-1212Z-0002-SM-5SI6W | GTEX-1212Z | 1 | 60-69 | 2 | - | 10 | Blood | EFO_0000572 | 478 | Actual Death |
| GTEX-12696-0002-SM-5SI6U | GTEX-12696 | 1 | 60-69 | 3 | - | 10 | Blood | EFO_0000572 | 470 | Actual Death |
| GTEX-1269C-0003-SM-5S2PB | GTEX-1269C | 2 | 60-69 | 2 | - | 10 | Blood | EFO_0000572 | 626 | Actual Death |
| GTEX-12BJ1-0003-SM-5SI6V | GTEX-12BJ1 | 1 | 60-69 | 0 | - | 10 | Blood | EFO_0000572 | 1178 | Actual Death |
| GTEX-12C56-0002-SM-5S2PC | GTEX-12C56 | 1 | 20-29 | 0 | - | 10 | Blood | EFO_0000572 | -56 | Actual Death |
| GTEX-RU1J-0003-SM-3K2A8 | GTEX-RU1J | 2 | 20-29 | 0 | - | 10 | Blood | EFO_0000572 | -41 | Actual Death |
| GTEX-RUSQ-0003-SM-2XCEB | GTEX-RUSQ | 1 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | 2 | Actual Death |
| GTEX-RWS6-0001-SM-3NMAL | GTEX-RWS6 | 2 | 60-69 | 0 | - | 10 | Blood | EFO_0000572 | 102 | Actual Death |
| GTEX-S32W-0004-SM-2XCE9 | GTEX-S32W | 2 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | -130 | Actual Death |
| GTEX-S4Q7-0003-SM-3NM8M | GTEX-S4Q7 | 1 | 20-29 | 0 | - | 10 | Blood | EFO_0000572 | -157 | Actual Death |
| GTEX-S7SF-0001-SM-3K2BE | GTEX-S7SF | 2 | 20-29 | 0 | - | 10 | Blood | EFO_0000572 | -9 | Actual Death |
| GTEX-S95S-0002-SM-3NM8K | GTEX-S95S | 1 | 60-69 | 0 | - | 10 | Blood | EFO_0000572 | -142 | Actual Death |
| GTEX-SIU7-0001-SM-3NMAW | GTEX-SIU7 | 1 | 50-59 | 0 | - | 9.9 | Blood | EFO_0000572 | -65 | Actual Death |
| GTEX-SN8G-0001-SM-3NM8L | GTEX-SN8G | 2 | 50-59 | 2 | - | 10 | Blood | EFO_0000572 | 966 | Actual Death |
| GTEX-SNOS-0003-SM-3NMAO | GTEX-SNOS | 1 | 40-49 | 0 | - | 10 | Blood | EFO_0000572 | -1226 | Actual Death |
| GTEX-SSA3-0002-SM-3P61R | GTEX-SSA3 | 1 | 60-69 | - | - | 10 | Blood | EFO_0000572 | -1114 | Cross Clamp Applied |
| GTEX-SUCS-0002-SM-3NMAJ | GTEX-SUCS | 1 | 70-79 | 0 | - | 10 | Blood | EFO_0000572 | -196 | Actual Death |
| GTEX-T5JC-0001-SM-3NMAK | GTEX-T5JC | 1 | 20-29 | 2 | - | 10 | Blood | EFO_0000572 | 461 | Actual Death |
| GTEX-T5JW-0003-SM-3NMAD | GTEX-T5JW | 2 | 20-29 | 0 | - | 9.9 | Blood | EFO_0000572 | -299 | Actual Death |
| GTEX-T6MN-0002-SM-3NMAH | GTEX-T6MN | 1 | 50-59 | 2 | - | 10 | Blood | EFO_0000572 | 564 | Actual Death |
| GTEX-T6MO-0003-SM-3NMAG | GTEX-T6MO | 2 | 40-49 | 0 | - | 10 | Blood | EFO_0000572 | -161 | Actual Death |
| GTEX-TKQ1-0003-SM-3NMAE | GTEX-TKQ1 | 1 | 30-39 | 0 | - | 10 | Blood | EFO_0000572 | -154 | Actual Death |
| GTEX-TKQ2-0004-SM-3NMAC | GTEX-TKQ2 | 1 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | -52 | Actual Death |
| GTEX-TML8-0001-SM-3NMAF | GTEX-TML8 | 2 | 40-49 | 0 | - | 10 | Blood | EFO_0000572 | -47 | Actual Death |
| GTEX-TMZS-0001-SM-3P61Q | GTEX-TMZS | 1 | 60-69 | - | - | 10 | Blood | EFO_0000572 | -136 | Cross Clamp Applied |
| GTEX-U3ZG-0001-SM-47JYF | GTEX-U3ZG | 1 | 50-59 | - | - | 10 | Blood | EFO_0000572 | -25 | Cross Clamp Applied |
| GTEX-U3ZH-0002-SM-3NMDD | GTEX-U3ZH | 1 | 30-39 | 0 | - | 10 | Blood | EFO_0000572 | -15 | Actual Death |
| GTEX-U3ZM-0002-SM-3NMDM | GTEX-U3ZM | 1 | 40-49 | 0 | - | 10 | Blood | EFO_0000572 | -83 | Actual Death |
| GTEX-U3ZN-0002-SM-3NMDF | GTEX-U3ZN | 2 | 30-39 | 0 | - | 10 | Blood | EFO_0000572 | -100 | Actual Death |
| GTEX-UPIC-0002-SM-3NMDC | GTEX-UPIC | 2 | 20-29 | 0 | - | 10 | Blood | EFO_0000572 | -68 | Actual Death |
| GTEX-UPJH-0001-SM-3NMDE | GTEX-UPJH | 1 | 50-59 | 2 | - | 10 | Blood | EFO_0000572 | 653 | Actual Death |
| GTEX-UPK5-0003-SM-3NMDI | GTEX-UPK5 | 1 | 40-49 | 0 | - | 10 | Blood | EFO_0000572 | 795 | Actual Death |
| GTEX-V1D1-0003-SM-3NMDP | GTEX-V1D1 | 1 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | -37 | Actual Death |
| GTEX-V955-0004-SM-3NMDH | GTEX-V955 | 1 | 60-69 | 0 | - | 10 | Blood | EFO_0000572 | -84 | Actual Death |
| GTEX-VJYA-0001-SM-3NMDJ | GTEX-VJYA | 1 | 60-69 | 0 | - | 9.2 | Blood | EFO_0000572 | -129 | Actual Death |
| GTEX-VUSG-0003-SM-3NMDK | GTEX-VUSG | 1 | 50-59 | 0 | - | 9.8 | Blood | EFO_0000572 | 114 | Actual Death |
| GTEX-VUSH-0004-SM-3P61T | GTEX-VUSH | 1 | 30-39 | - | - | 9.7 | Blood | EFO_0000572 | -90 | Cross Clamp Applied |
| GTEX-W5WG-0002-SM-3NMDN | GTEX-W5WG | 2 | 50-59 | 0 | - | 9.8 | Blood | EFO_0000572 | -43 | Actual Death |
| GTEX-W5X1-0001-SM-3P61V | GTEX-W5X1 | 2 | 40-49 | 0 | - | 9.3 | Blood | EFO_0000572 | -1133 | Actual Death |
| GTEX-WCDI-0002-SM-3P61U | GTEX-WCDI | 1 | 50-59 | - | - | 9.8 | Blood | EFO_0000572 | -1064 | Cross Clamp Applied |
| GTEX-WEY5-0001-SM-3P61Z | GTEX-WEY5 | 2 | 40-49 | 0 | - | 10 | Blood | EFO_0000572 | 1274 | Actual Death |
| GTEX-WFG7-0001-SM-3P61S | GTEX-WFG7 | 1 | 20-29 | 0 | - | 9.6 | Blood | EFO_0000572 | -104 | Actual Death |
| GTEX-WFG8-0001-SM-4LVN8 | GTEX-WFG8 | 1 | 20-29 | 0 | - | 10 | Blood | EFO_0000572 | -56 | Actual Death |
| GTEX-WFJO-0002-SM-3P61X | GTEX-WFJO | 1 | 30-39 | 0 | - | 9.6 | Blood | EFO_0000572 | -104 | Actual Death |
| GTEX-WFON-0001-SM-3P61W | GTEX-WFON | 1 | 40-49 | 0 | - | 9.7 | Blood | EFO_0000572 | -164 | Actual Death |
| GTEX-WH7G-0002-SM-4LVN9 | GTEX-WH7G | 1 | 40-49 | 0 | - | 10 | Blood | EFO_0000572 | -166 | Actual Death |
| GTEX-WHPG-0004-SM-3NMDO | GTEX-WHPG | 1 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | -113 | Actual Death |
| GTEX-WHSB-0002-SM-4M1ZR | GTEX-WHSB | 1 | 50-59 | 0 | - | 9.6 | Blood | EFO_0000572 | -68 | Actual Death |
| GTEX-WHWD-0003-SM-4M1ZS | GTEX-WHWD | 1 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | -42 | Actual Death |
| GTEX-WOFM-0001-SM-4OOT2 | GTEX-WOFM | 1 | 20-29 | 0 | - | 10 | Blood | EFO_0000572 | -163 | Actual Death |
| GTEX-WRHK-0001-SM-4WWDD | GTEX-WRHK | 2 | 20-29 | 0 | - | 9.9 | Blood | EFO_0000572 | -16 | Actual Death |
| GTEX-WWTW-0002-SM-4MVNH | GTEX-WWTW | 1 | 50-59 | 0 | - | 9.7 | Blood | EFO_0000572 | 535 | Actual Death |
| GTEX-WXYG-0004-SM-4MVOS | GTEX-WXYG | 2 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | -231 | Actual Death |
| GTEX-WY7C-0004-SM-4ONDS | GTEX-WY7C | 1 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | -115 | Actual Death |
| GTEX-WYVS-0004-SM-4ONDT | GTEX-WYVS | 2 | 40-49 | 0 | - | 10 | Blood | EFO_0000572 | 82 | Actual Death |
| GTEX-WZTO-0001-SM-4PQZY | GTEX-WZTO | 1 | 40-49 | 1 | - | 10 | Blood | EFO_0000572 | 416 | Actual Death |
| GTEX-X15G-0001-SM-4PQZV | GTEX-X15G | 2 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | -116 | Actual Death |
| GTEX-X3Y1-0001-SM-4PQYP | GTEX-X3Y1 | 1 | 40-49 | 0 | - | 10 | Blood | EFO_0000572 | -35 | Actual Death |
| GTEX-X4EO-0004-SM-4QARM | GTEX-X4EO | 2 | 60-69 | 3 | - | 9.6 | Blood | EFO_0000572 | 721 | Actual Death |
| GTEX-X4EP-0004-SM-4PQZX | GTEX-X4EP | 2 | 60-69 | 4 | - | 10 | Blood | EFO_0000572 | 1051 | Actual Death |
| GTEX-X4LF-0002-SM-4QASG | GTEX-X4LF | 1 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | -106 | Actual Death |
| GTEX-X585-0002-SM-46MVA | GTEX-X585 | 1 | 50-59 | 4 | - | 10 | Blood | EFO_0000572 | 713 | Actual Death |
| GTEX-X5EB-0004-SM-46MWA | GTEX-X5EB | 1 | 40-49 | 0 | - | 9.8 | Blood | EFO_0000572 | -101 | Actual Death |
| GTEX-X638-0003-SM-47JZ1 | GTEX-X638 | 2 | 70-79 | - | - | 9.9 | Blood | EFO_0000572 | -270 | Cross Clamp Applied |
| GTEX-X88G-0004-SM-47JZ6 | GTEX-X88G | 1 | 30-39 | - | - | 10 | Blood | EFO_0000572 | -94 | Cross Clamp Applied |
| GTEX-XBED-0003-SM-47JWP | GTEX-XBED | 1 | 60-69 | 0 | - | 9.7 | Blood | EFO_0000572 | -116 | Actual Death |
| GTEX-XBEW-0002-SM-4AT5O | GTEX-XBEW | 1 | 40-49 | 0 | - | 9.8 | Blood | EFO_0000572 | 338 | Actual Death |
| GTEX-XGQ4-0004-SM-4AT5S | GTEX-XGQ4 | 1 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | -33 | Actual Death |
| GTEX-XLM4-0004-SM-4AT5I | GTEX-XLM4 | 1 | 60-69 | 3 | - | 10 | Blood | EFO_0000572 | 555 | Actual Death |
| GTEX-XMK1-0001-SM-4B64F | GTEX-XMK1 | 1 | 40-49 | 0 | - | 9.8 | Blood | EFO_0000572 | -77 | Actual Death |
| GTEX-XPT6-0001-SM-4B64G | GTEX-XPT6 | 1 | 20-29 | 0 | - | 9.7 | Blood | EFO_0000572 | -41 | Actual Death |
| GTEX-XQ3S-0001-SM-4B64K | GTEX-XQ3S | 1 | 20-29 | 1 | - | 9.2 | Blood | EFO_0000572 | 697 | Actual Death |
| GTEX-XUJ4-0004-SM-4BOQE | GTEX-XUJ4 | 2 | 60-69 | 0 | - | 9.9 | Blood | EFO_0000572 | -149 | Actual Death |
| GTEX-XUYS-0002-SM-47JXL | GTEX-XUYS | 1 | 50-59 | - | - | 10 | Blood | EFO_0000572 | -210 | Cross Clamp Applied |
| GTEX-XXEK-0004-SM-4BRWO | GTEX-XXEK | 1 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | -129 | Actual Death |
| GTEX-XYKS-0002-SM-4BRWN | GTEX-XYKS | 2 | 60-69 | 0 | - | 10 | Blood | EFO_0000572 | -107 | Actual Death |
| GTEX-Y114-0002-SM-4TT78 | GTEX-Y114 | 2 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | -221 | Actual Death |
| GTEX-Y3IK-0001-SM-4WWE1 | GTEX-Y3IK | 2 | 50-59 | 0 | - | 9.8 | Blood | EFO_0000572 | -91 | Actual Death |
| GTEX-Y5LM-0003-SM-4V6G1 | GTEX-Y5LM | 2 | 40-49 | 0 | - | 10 | Blood | EFO_0000572 | -469 | Actual Death |
| GTEX-Y5V5-0001-SM-4V6FZ | GTEX-Y5V5 | 2 | 60-69 | 0 | - | 10 | Blood | EFO_0000572 | 115 | Actual Death |
| GTEX-Y5V6-0003-SM-4V6FX | GTEX-Y5V6 | 1 | 60-69 | 0 | - | 10 | Blood | EFO_0000572 | -35 | Actual Death |
| GTEX-Y8DK-0004-SM-4RGM7 | GTEX-Y8DK | 1 | 60-69 | 2 | - | 9.9 | Blood | EFO_0000572 | 932 | Presumed Death |
| GTEX-Y8E4-0003-SM-4V6FY | GTEX-Y8E4 | 1 | 40-49 | 0 | - | 9.8 | Blood | EFO_0000572 | 240 | Actual Death |
| GTEX-Y8E5-0002-SM-57WD9 | GTEX-Y8E5 | 1 | 60-69 | - | - | 10 | Blood | EFO_0000572 | -118 | Cross Clamp Applied |
| GTEX-Y8LW-0002-SM-4V6G2 | GTEX-Y8LW | 2 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | -69 | Actual Death |
| GTEX-Y9LG-0001-SM-4VBRQ | GTEX-Y9LG | 1 | 30-39 | 0 | - | 10 | Blood | EFO_0000572 | -164 | Actual Death |
| GTEX-YB5E-0001-SM-4VDSV | GTEX-YB5E | 1 | 40-49 | 0 | - | 10 | Blood | EFO_0000572 | -813 | Actual Death |
| GTEX-YB5K-0003-SM-4VDSN | GTEX-YB5K | 2 | 40-49 | 0 | - | 10 | Blood | EFO_0000572 | -159 | Actual Death |
| GTEX-YEC3-0002-SM-4W1YI | GTEX-YEC3 | 1 | 50-59 | 0 | - | 9.6 | Blood | EFO_0000572 | -110 | Actual Death |
| GTEX-YEC4-0002-SM-4W1Z6 | GTEX-YEC4 | 1 | 40-49 | 0 | - | 10 | Blood | EFO_0000572 | -249 | Actual Death |
| GTEX-YF7O-0004-SM-4W1ZT | GTEX-YF7O | 1 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | -61 | Actual Death |
| GTEX-YFCO-0003-SM-4W21I | GTEX-YFCO | 1 | 40-49 | 0 | - | 10 | Blood | EFO_0000572 | -96 | Actual Death |
| GTEX-ZC5H-0004-SM-4WAXK | GTEX-ZC5H | 2 | 40-49 | 0 | - | 9 | Blood | EFO_0000572 | 206 | Actual Death |
| GTEX-ZDTS-0001-SM-4WAXW | GTEX-ZDTS | 1 | 60-69 | 2 | - | 10 | Blood | EFO_0000572 | 505 | Actual Death |
| GTEX-ZDTT-0004-SM-4WKG3 | GTEX-ZDTT | 1 | 60-69 | 0 | - | 10 | Blood | EFO_0000572 | -108 | Actual Death |
| GTEX-ZEX8-0004-SM-4WKFQ | GTEX-ZEX8 | 1 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | -57 | Actual Death |
| GTEX-ZF29-0002-SM-4WKF2 | GTEX-ZF29 | 2 | 60-69 | 0 | - | 10 | Blood | EFO_0000572 | -132 | Actual Death |
| GTEX-ZF2S-0004-SM-4WKFE | GTEX-ZF2S | 2 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | -42 | Actual Death |
| GTEX-ZF3C-0001-SM-4WWAW | GTEX-ZF3C | 2 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | 385 | Actual Death |
| GTEX-ZG7Y-0003-SM-4WWEJ | GTEX-ZG7Y | 1 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | -148 | Actual Death |
| GTEX-ZLV1-0001-SM-4WWAO | GTEX-ZLV1 | 2 | 60-69 | 0 | - | 9.9 | Blood | EFO_0000572 | 1276 | Actual Death |
| GTEX-ZLWG-0004-SM-4WWD5 | GTEX-ZLWG | 2 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | -245 | Actual Death |
| GTEX-ZP4G-0003-SM-4WWED | GTEX-ZP4G | 2 | 20-29 | 0 | - | 9.6 | Blood | EFO_0000572 | -56 | Actual Death |
| GTEX-ZPCL-0004-SM-4WWD6 | GTEX-ZPCL | 2 | 60-69 | 0 | - | 8.2 | Blood | EFO_0000572 | -54 | Actual Death |
| GTEX-ZPIC-0002-SM-4WWEC | GTEX-ZPIC | 2 | 40-49 | 0 | - | 10 | Blood | EFO_0000572 | -90 | Actual Death |
| GTEX-ZPU1-0004-SM-4WWAV | GTEX-ZPU1 | 1 | 40-49 | 0 | - | 10 | Blood | EFO_0000572 | -87 | Actual Death |
| GTEX-ZQG8-0001-SM-4YCDH | GTEX-ZQG8 | 2 | 60-69 | 0 | - | 10 | Blood | EFO_0000572 | -71 | Actual Death |
| GTEX-ZQUD-0003-SM-4YCD3 | GTEX-ZQUD | 1 | 30-39 | 0 | - | 10 | Blood | EFO_0000572 | -133 | Actual Death |
| GTEX-ZT9W-0003-SM-4YCE6 | GTEX-ZT9W | 1 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | -103 | Actual Death |
| GTEX-ZT9X-0004-SM-4YCDT | GTEX-ZT9X | 1 | 40-49 | 0 | - | 9.8 | Blood | EFO_0000572 | -163 | Actual Death |
| GTEX-ZTPG-0002-SM-4YCEI | GTEX-ZTPG | 2 | 20-29 | 0 | - | 10 | Blood | EFO_0000572 | -101 | Actual Death |
| GTEX-ZTSS-0004-SM-4YCCS | GTEX-ZTSS | 1 | 40-49 | 0 | - | 10 | Blood | EFO_0000572 | -70 | Actual Death |
| GTEX-ZTTD-0001-SM-4YCD5 | GTEX-ZTTD | 1 | 50-59 | 3 | - | 9.9 | Blood | EFO_0000572 | 186 | Actual Death |
| GTEX-ZTX8-0002-SM-4YCEU | GTEX-ZTX8 | 1 | 20-29 | 0 | - | 8.3 | Blood | EFO_0000572 | -188 | Actual Death |
| GTEX-ZUA1-0002-SM-4YCF7 | GTEX-ZUA1 | 1 | 40-49 | 2 | - | 9.3 | Blood | EFO_0000572 | 762 | Actual Death |
| GTEX-ZV6S-0003-SM-4YCCT | GTEX-ZV6S | 2 | 40-49 | 0 | - | 10 | Blood | EFO_0000572 | -108 | Actual Death |
| GTEX-ZV7C-0003-SM-4YCF6 | GTEX-ZV7C | 1 | 50-59 | 0 | - | 10 | Blood | EFO_0000572 | -223 | Actual Death |
| GTEX-ZVT2-0001-SM-57WCK | GTEX-ZVT2 | 2 | 50-59 | 0 | - | 9.6 | Blood | EFO_0000572 | -143 | Actual Death |
| GTEX-ZVTK-0003-SM-51MRV | GTEX-ZVTK | 1 | 20-29 | 1 | - | 9.8 | Blood | EFO_0000572 | 725 | Actual Death |
| GTEX-ZVZP-0004-SM-51MS8 | GTEX-ZVZP | 1 | 50-59 | 0 | - | 9.6 | Blood | EFO_0000572 | -170 | Actual Death |
| GTEX-ZXES-0004-SM-57WCW | GTEX-ZXES | 2 | 30-39 | 0 | - | 10 | Blood | EFO_0000572 | -210 | Actual Death |
| Sample | Subject | Gender | Age | DTH-HRDY | SMAT-SSCR | SMRIN | SMTS | SMUBRID | SMTSISCH | SMTSTPTREF |
Variable description
You can specify the sample network to download by phenotypic variable and you will get a TF-by-gene matrix named after the sample in Banovich et al.
| Sample name | Biosamaple ID | Sex | Pop. code | Pop. name | Superpop. code | Superpop. name | Pop. ID | Data collections | Network |
|---|---|---|---|---|---|---|---|---|---|
| NA18489 | SAME124102 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18504 | SAME125061 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release | |
| NA18511 | SAME124885 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18516 | SAME124884 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release | |
| NA18523 | SAME124670 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release | |
| NA18910 | SAME123402 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18934 | SAME123036 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18488 | SAME124103 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19095 | SAME123170 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18508 | SAME124318 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18510 | SAME124886 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18852 | SAME124732 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release | |
| NA18522 | SAME124669 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release | |
| NA18871 | SAME125102 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release | |
| NA19153 | SAME123019 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19160 | SAME123758 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19172 | SAME124420 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19184 | SAME123859 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19189 | SAME123869 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19204 | SAME122985 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19209 | SAME122994 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18856 | SAME124736 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release | |
| NA18868 | SAME124910 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18870 | SAME125101 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19099 | SAME125240 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19222 | SAME124147 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19239 | SAME125081 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,Human Genome Structural Variation Consortium, Phase 2,The Human Genome Structural Variation Consortium,1000 Genomes phase 3 release,1000 Genomes phase 1 release | |
| NA19223 | SAME125223 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19235 | SAME125002 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19247 | SAME123691 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18907 | SAME123563 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18933 | SAME123037 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19108 | SAME125378 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19122 | SAME125014 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release | |
| NA19127 | SAME125017 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release | |
| NA19141 | SAME124607 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19146 | SAME125080 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19152 | SAME123017 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19171 | SAME124419 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19176 | SAME124416 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release | |
| NA19190 | SAME124041 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19203 | SAME122988 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release | |
| NA19210 | SAME125383 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19102 | SAME125112 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19107 | SAME123393 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19114 | SAME122953 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19119 | SAME122944 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19121 | SAME125015 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19138 | SAME125236 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19140 | SAME124608 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release | |
| NA18853 | SAME124733 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release | |
| NA18916 | SAME123408 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18923 | SAME123205 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19096 | SAME123662 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19093 | SAME123172 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18505 | SAME125062 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19098 | SAME123633 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18517 | SAME124883 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18487 | SAME124098 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18499 | SAME124059 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18502 | SAME125055 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18507 | SAME125060 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release | |
| NA18519 | SAME124888 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19116 | SAME124911 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19128 | SAME125022 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release | |
| NA19130 | SAME125229 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19147 | SAME124613 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19159 | SAME124716 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18858 | SAME124730 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18909 | SAME123561 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19248 | SAME123681 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18913 | SAME123403 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release | |
| NA19185 | SAME123858 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19101 | SAME123955 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release | |
| NA19197 | SAME125309 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19113 | SAME123838 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19200 | SAME122989 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19118 | SAME122943 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19236 | SAME125001 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19137 | SAME125235 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19144 | SAME123373 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19149 | SAME124605 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19175 | SAME124887 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19207 | SAME122984 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19214 | SAME125386 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18855 | SAME124735 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release | |
| NA18862 | SAME125118 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release | |
| NA18867 | SAME124904 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18874 | SAME125105 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release | |
| NA19226 | SAME125219 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release | |
| NA19238 | SAME124999 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,Human Genome Structural Variation Consortium, Phase 2,The Human Genome Structural Variation Consortium,1000 Genomes phase 3 release,1000 Genomes phase 1 release | |
| NA19257 | SAME123495 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18486 | SAME124099 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18498 | SAME124058 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18501 | SAME124991 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release | |
| NA18520 | SAME123565 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18912 | SAME123404 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18917 | SAME123407 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18924 | SAME123202 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release | |
| NA18859 | SAME124731 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release | |
| NA18861 | SAME124905 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA18873 | SAME123536 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19256 | SAME124707 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19198 | SAME124049 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19201 | SAME122990 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19206 | SAME122983 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19213 | SAME125384 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19225 | SAME125218 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19117 | SAME124914 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19129 | SAME125021 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19131 | SAME125230 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19143 | SAME124609 | female | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19150 | SAME124838 | male | YRI | Yoruba | AFR | African Ancestry | YRI | 1000 Genomes on GRCh38,1000 Genomes 30x on GRCh38,1000 Genomes phase 3 release,1000 Genomes phase 1 release,Geuvadis | |
| NA19182 | |||||||||
| NA19181 | |||||||||
| NA19179 | |||||||||
| NA19178 | |||||||||
| NA19193 | |||||||||
| NA19192 | |||||||||
| Sample | Sample ID | Sex | Pop. code | Pop. name | Superpop. code | Superpop. name | Pop. ID | Data | Network |